Alternatives and similar repositories for pySCA

Users that are interested in pySCA are comparing it to the libraries listed below

• SBRG / ssbio
  A Python framework for structural systems biology
  ☆109Updated 4 years ago
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆153Updated 3 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆66Updated 7 years ago
• UCLOrengoGroup / cath-tools
  Protein structure comparison tools such as SSAP and SNAP
  ☆64Updated last year
• hsalis / SalisLabCode
  Models, design algorithms, and other software related to Salis lab publications
  ☆35Updated 9 months ago
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆53Updated 5 months ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆74Updated 2 weeks ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆40Updated last month
• debbiemarkslab / plmc
  Inference of couplings in proteins and RNAs from sequence variation
  ☆111Updated 2 years ago
• Benjamin-Lee / CodonAdaptationIndex
  Python Implementation of Codon Adaption Index
  ☆37Updated 2 years ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆51Updated last year
• jbkinney / logomaker
  Software for the visualization of sequence-function relationships
  ☆201Updated 2 months ago
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆139Updated 8 months ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆35Updated 4 years ago
• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆90Updated 6 months ago
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆42Updated this week
• mmagnus / rna-tools
  🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …
  ☆177Updated 2 weeks ago
• satoken / centroid-rna-package
  Centroid RNA package
  ☆19Updated 4 years ago
• davidhoover / DNAWorks
  Automatic oligonucleotide design for PCR-based gene synthesis
  ☆47Updated 6 years ago
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆58Updated last year
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆105Updated 5 years ago
• eternagame / draw_rna
  Draw RNA secondary structures in python.
  ☆48Updated last month
• jbloomlab / dms_tools2
  software for the analysis and visualization of deep mutational scanning data
  ☆35Updated 2 years ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆67Updated 3 years ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆84Updated this week
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆56Updated last year
• SysBioChalmers / GECKO
  Toolbox for including enzyme constraints on a genome-scale model.
  ☆76Updated 3 months ago
• SBRG / precise-db
  A high-fidelity E. coli RNA-seq compendium
  ☆32Updated 4 years ago
• lehner-lab / DiMSum
  An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies
  ☆33Updated 3 months ago
• Merck / deepbgc
  BGC Detection and Classification Using Deep Learning
  ☆152Updated last year