reisalex / SynBioMTSLinks
An automated model test system for synthetic biology models of gene expression and regulation.
☆15Updated 5 years ago
Alternatives and similar repositories for SynBioMTS
Users that are interested in SynBioMTS are comparing it to the libraries listed below
Sorting:
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆46Updated 2 weeks ago
- An RNA manipulation library.☆56Updated last year
- ☆23Updated 5 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated 3 months ago
- Comprehensive Python client for the Uniprot REST API☆52Updated last month
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 3 months ago
- A PCR primer tool for DNA assembly flows☆34Updated last year
- Python package for analyzing and visualizing iModulons☆14Updated last week
- A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs☆54Updated last year
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆62Updated 6 months ago
- Software for predicting translation initiation rates in bacteria☆30Updated 3 months ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆29Updated 10 months ago
- Models, design algorithms, and other software related to Salis lab publications☆35Updated last year
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- Multi-class signal peptide prediction and structure decoding model.☆97Updated 9 months ago
- BGC Detection and Classification Using Deep Learning☆155Updated 2 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- ☆14Updated 6 years ago
- Absolute quantification package based on quantms.io☆16Updated last month
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 6 years ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆30Updated 2 years ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆93Updated last year
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆20Updated 3 years ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆21Updated 2 years ago
- Tool for deep mutational scanning experiments.☆55Updated 8 months ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- D3.js based visualizations of cobrapy metabolic models☆48Updated 5 years ago