Alternatives and similar repositories for glypy

Users that are interested in glypy are comparing it to the libraries listed below

• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆94Updated last year
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated 3 weeks ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆70Updated 8 years ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆77Updated last month
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 5 months ago
• SBRG / ssbio
  A Python framework for structural systems biology
  ☆110Updated 5 years ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆56Updated 3 years ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆68Updated 4 years ago
• BojarLab / glycowork
  Package for processing and analyzing glycans and their role in biology.
  ☆83Updated 2 weeks ago
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆110Updated 5 years ago
• pFindStudio / pGlyco3
  ☆21Updated 10 months ago
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆44Updated 3 weeks ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆54Updated 2 months ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆55Updated 3 weeks ago
• matthiaskoenig / brendapy
  BRENDA parser in python
  ☆22Updated 3 years ago
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆53Updated last month
• CCMS-UCSD / GNPS_Workflows
  Public Workflows at GNPS
  ☆64Updated last year
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• Arcadia-Science / ProteinCartography
  A pipeline to build similarity maps of protein space
  ☆40Updated 2 months ago
• debbiemarkslab / plmc
  Inference of couplings in proteins and RNAs from sequence variation
  ☆114Updated 2 years ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆36Updated 4 years ago
• UCLOrengoGroup / cath-tools
  Protein structure comparison tools such as SSAP and SNAP
  ☆66Updated 2 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆67Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆65Updated 5 months ago
• prehensilecode / alphafold_singularity
  Singularity recipe for AlphaFold
  ☆37Updated last year
• denisbeslic / denovopipeline
  Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.
  ☆44Updated last year
• MannLabs / alphapeptdeep
  Deep learning framework for proteomics
  ☆140Updated 2 weeks ago
• mgalardini / pdb2uniprot
  Convert PDB residues to their Uniprot equivalents
  ☆17Updated 5 years ago
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆29Updated 3 years ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆101Updated last week