openvax / pepdataLinks
Python interface to amino acid properties and IEDB
☆57Updated 11 months ago
Alternatives and similar repositories for pepdata
Users that are interested in pepdata are comparing it to the libraries listed below
Sorting:
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- ☆38Updated last year
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- Python interface to running command-line and web-based MHC binding predictors☆98Updated 11 months ago
- Absolute quantification package based on quantms.io☆15Updated 4 months ago
- Tool for deep mutational scanning experiments.☆54Updated 6 months ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆47Updated this week
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- Downloader for ENCODE☆32Updated 4 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆59Updated last week
- ☆65Updated last year
- Python package to plot sequence logos☆29Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated this week
- An RNA manipulation library.☆57Updated last year
- Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.☆19Updated 7 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆44Updated 9 years ago
- A python library for creating simulated regulatory DNA sequences☆39Updated 2 years ago
- Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id☆46Updated 2 years ago
- Python biomart API☆68Updated 2 years ago
- A python package for pathway visualization☆38Updated 4 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Updated 6 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated last month
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Updated 2 years ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆58Updated 11 months ago
- ☆21Updated 5 months ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated 3 weeks ago
- ☆14Updated 9 years ago