openvax / pepdataLinks
Python interface to amino acid properties and IEDB
☆57Updated last year
Alternatives and similar repositories for pepdata
Users that are interested in pepdata are comparing it to the libraries listed below
Sorting:
- Absolute quantification package based on quantms.io☆16Updated last month
- ☆38Updated last year
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Python package to plot sequence logos☆29Updated 2 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆61Updated 2 weeks ago
- Python interface to running command-line and web-based MHC binding predictors☆99Updated last year
- ☆15Updated 9 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- Downloader for ENCODE☆32Updated 5 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆48Updated last week
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- Tool for deep mutational scanning experiments.☆54Updated 8 months ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆45Updated 9 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆42Updated 3 weeks ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 9 months ago
- An RNA manipulation library.☆56Updated last year
- Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id☆47Updated 2 years ago
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- Multi-Omics Peptide Generator☆28Updated last week
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆39Updated last week
- DRUGZ software☆24Updated 4 years ago
- Find common blocks and differences between DNA sequences☆42Updated last week
- Python port of the R Bioconductor `seqLogo` package☆35Updated last year
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆58Updated last year
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 3 months ago
- 3D hotspot mutation proximity analysis tool☆49Updated 2 years ago
- ☆42Updated 7 years ago
- Comprehensive Python client for the Uniprot REST API☆52Updated last month