openvax / pepdataLinks
Python interface to amino acid properties and IEDB
☆57Updated last year
Alternatives and similar repositories for pepdata
Users that are interested in pepdata are comparing it to the libraries listed below
Sorting:
- A BioJS viewer for protein sequence features☆53Updated 3 years ago
- Absolute quantification package based on quantms.io☆16Updated 4 months ago
- ☆38Updated 2 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated last month
- Python package to plot sequence logos☆29Updated 2 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Updated 7 years ago
- Python interface to running command-line and web-based MHC binding predictors☆99Updated last year
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Updated 9 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆62Updated this week
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆44Updated last week
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 4 years ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- A Python package for gene network analysis☆32Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆51Updated this week
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated last year
- DRUGZ software☆24Updated 4 years ago
- Tool for deep mutational scanning experiments.☆57Updated 10 months ago
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Updated 2 years ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆29Updated 3 years ago
- Multi-Omics Peptide Generator☆30Updated 3 months ago
- Flexible analysis of high-content CRISPR screening☆30Updated 5 months ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- ☆23Updated 5 years ago
- IPAW: a Nextflow workflow for proteogenomics☆29Updated last year
- ☆24Updated 2 months ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- Downloader for ENCODE☆32Updated 5 years ago