Alternatives and similar repositories for ProtVista

Users that are interested in ProtVista are comparing it to the libraries listed below

• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆39Updated last week
• nf-core / epitopeprediction
  A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
  ☆47Updated last week
• kentsislab / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆27Updated 7 years ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆57Updated last year
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆56Updated last year
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆42Updated last week
• lehtiolab / proteogenomics-analysis-workflow
  IPAW: a Nextflow workflow for proteogenomics
  ☆28Updated last year
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆45Updated 9 years ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated 2 years ago
• jbloomlab / dms_tools2
  software for the analysis and visualization of deep mutational scanning data
  ☆34Updated 3 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆66Updated last year
• bigbio / ibaqpy
  Absolute quantification package based on quantms.io
  ☆16Updated last month
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆52Updated 3 weeks ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆68Updated 3 years ago
• calipho-sib / feature-viewer
  Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt project
  ☆118Updated last year
• latendre / PythonCyc
  ☆22Updated 5 years ago
• mikessh / migmap
  HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
  ☆52Updated last year
• atc3 / maxquant_linux_guide
  A guide to running MaxQuant in Linux
  ☆34Updated 5 years ago
• pFindStudio / pFind3
  ☆28Updated 9 months ago
• bigbio / pmultiqc
  A library for QC report based on MultiQC framework
  ☆22Updated this week
• cbcrg / tcoffee
  A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
  ☆108Updated 3 weeks ago
• pegi3s / dockerfiles
  This repository contains Docker files for the images maintained by the Phenotypic Evolution Group at the Institute for Molecular and Cell…
  ☆53Updated last week
• labomics / MetaLogo
  MetaLogo: a heterogeneity-aware sequence logo generator and aligner
  ☆21Updated 2 years ago
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated last month
• psathyrella / partis
  B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction
  ☆60Updated last week
• CapraLab / cosmis
  COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …
  ☆17Updated 2 years ago
• openvax / mhctools
  Python interface to running command-line and web-based MHC binding predictors
  ☆98Updated last year
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆54Updated 7 months ago
• betteridiot / seqlogo
  Python port of the R Bioconductor `seqLogo` package
  ☆35Updated last year
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆43Updated 2 months ago