rcedgar / usearch_old_binariesLinks
Executable files for usearch versions 5 through 11, donated to the public domain
☆22Updated last year
Alternatives and similar repositories for usearch_old_binaries
Users that are interested in usearch_old_binaries are comparing it to the libraries listed below
Sorting:
- A general metagenomics data mining system focus on robust microbiome research☆58Updated last year
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Updated 8 months ago
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆65Updated last year
- Creating plasmid maps inside ggplot.☆89Updated last month
- Qiime2 snakemake pipeline☆19Updated last year
- Compute strain abundance in a defined microbial community☆10Updated 2 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆54Updated 2 months ago
- SHOOT.bio - the phylogenetic search engine☆25Updated 2 years ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆53Updated 3 months ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 4 months ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Updated 3 months ago
- NCBI taxonomic identifier (taxid) changelog, including taxids deletion, new adding, merge, reuse, and rank/name changes.☆29Updated 5 months ago
- Parse NCBI taxonomy and accessions to find taxonomic assignments☆77Updated 2 months ago
- gutSMASH☆55Updated last week
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆64Updated last week
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- Trimming tool for Oxford Nanopore sequence data☆22Updated 4 years ago
- ☆39Updated 2 years ago
- An R Package for Multiplex PCR Primer Design and Analysis☆28Updated 3 months ago
- A versatile toolkit for k-mers with taxonomic information☆79Updated last month
- ☆18Updated 4 years ago
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆23Updated 4 years ago
- finding conserved regions in highly diverse genomes☆15Updated 4 months ago
- Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation☆31Updated 4 years ago
- Repository of the integrated mouse gut metagenomic catalog☆19Updated 3 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- ☆41Updated last year
- Pathoscope: Species identification and strain attribution with unassembled sequencing data☆58Updated 6 years ago
- A QIIME 2 plugin for interaction with the Greengenes2 database☆33Updated last year