biodatalab / escape_excel
Escape Excel: a tool for preventing gene symbol and accession conversion errors
☆27Updated 11 months ago
Alternatives and similar repositories for escape_excel:
Users that are interested in escape_excel are comparing it to the libraries listed below
- Representation and manipulation of genomic intervals☆44Updated 3 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆44Updated 3 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- R package wrapping bedtools☆38Updated 3 weeks ago
- Explore design matrices interactively with R/Shiny☆37Updated 2 months ago
- Lollipop-diagram to interactively visualize genetic mutations☆31Updated 6 months ago
- Glimma R package☆50Updated 6 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆72Updated this week
- An htmlwidget version of igv, for RStudio and Shiny apps☆37Updated 3 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 4 months ago
- DESeq2 or edgeR☆22Updated 8 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- Genomic plot in trellis layout☆39Updated last year
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆16Updated 7 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated this week
- Visualise correlation results and test significancies of these☆22Updated 5 years ago
- A tidy interface for coverage analysis☆24Updated 5 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated last year
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆21Updated 2 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated last month
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 5 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated last year
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆44Updated last year
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Updated 2 years ago
- GOplot☆20Updated 8 years ago
- Flexible Bayesian inference of mutational signatures☆34Updated 2 years ago