Alternatives and similar repositories for SwabSeq

Users that are interested in SwabSeq are comparing it to the libraries listed below

• Lattice-Automation / repp
  repository-based plasmid design
  ☆29Updated 2 years ago
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆28Updated 2 weeks ago
• markziemann / dee2
  Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
  ☆41Updated this week
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• EBIvariation / CMAT
  ClinVar Mapping and Annotation Toolkit
  ☆19Updated last week
• lcdb / lcdb-wf
  Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis
  ☆23Updated 2 months ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆15Updated last year
• quinlan-lab / pathoscore
  pathoscore evaluates variant pathogenicity tools and scores.
  ☆21Updated 3 years ago
• Seeliglab / 2017---Deep-learning-yeast-UTRs
  Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"
  ☆15Updated 7 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆27Updated 4 months ago
• brianyiktaktsui / Skymap
  High-throughput gene to knowledge mapping through massive integration of public sequencing data.
  ☆31Updated 6 years ago
• pinellolab / PrimeDesign
  Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!
  ☆23Updated 2 years ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆36Updated this week
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 5 years ago
• markrobinsonuzh / CrispRVariants
  ☆25Updated 4 years ago
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆28Updated last month
• mnielLab / netTCR
  predicting peptide and TCR interaction
  ☆20Updated 4 years ago
• brineylab / grp-paper
  Code and data used in The Great Repertoire Project
  ☆30Updated 4 years ago
• widdowquinn / 2018-03-06-ibioic
  Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.
  ☆20Updated 7 years ago
• nygctech / PySeq2500
  Control an Illumina HiSeq 2500 System
  ☆20Updated 8 months ago
• ExpressionAnalysis / HLAProfiler
  Using k-mers to call HLA alleles in RNA sequencing data
  ☆22Updated 6 years ago
• pachterlab / BBB
  Bioinformatics for Benched Biologists
  ☆22Updated 5 years ago
• jcg / d-tailor
  ☆14Updated 6 years ago
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆23Updated 3 weeks ago
• Ad115 / EnsemblRest
  A Python interface to the Ensembl REST APIs, biological data at your fingertips.
  ☆12Updated last year
• pdxgx / neoepiscope
  predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data
  ☆27Updated last year
• nf-core / proteomicslfq
  Proteomics label-free quantification (LFQ) analysis pipeline
  ☆36Updated 5 months ago
• hart-lab / drugz
  DRUGZ software
  ☆23Updated 3 years ago