Nicolik / MESCnnLinks
MESCnn: MESC classification by neural network
☆9Updated last year
Alternatives and similar repositories for MESCnn
Users that are interested in MESCnn are comparing it to the libraries listed below
Sorting:
- ☆34Updated 3 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆37Updated 3 weeks ago
- Pipeline for computational pathology☆38Updated last year
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 5 months ago
- Interpretable Gland-Graph Networks☆22Updated last year
- Virtual Alignment of pathoLogy Image Series☆166Updated 3 weeks ago
- Re-stained whole slide image alignment☆33Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆72Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆57Updated 2 years ago
- Package using StarDist and Python that performs object detection and spatial analysis on H&E images☆4Updated 8 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆33Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆79Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated 2 weeks ago
- ☆10Updated 2 years ago
- QuPath extension for Segment Anything Model (SAM)☆113Updated 4 months ago
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- PAthological QUpath Obsession - QuPath and Python conversations☆118Updated 6 months ago
- ☆20Updated 2 years ago
- Encoder-Decoder Cell and Nuclei segmentation models☆93Updated 2 months ago
- An open-source digital pathology based rapid image annotation tool☆79Updated last week
- 🔬 Code-free deep segmentation for computational pathology☆53Updated last year
- Coincides with blogpost for using geojson and shapely☆32Updated 4 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆34Updated last year
- Transfer trained StarDist models across imaging modalities☆3Updated 9 months ago
- Segment Anything for Histopathology☆34Updated last month
- Stain normalization tools for histological analysis and computational pathology☆147Updated 6 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- Image-translation-assisted segmentation in 3D☆26Updated 3 years ago
- ☆42Updated 7 months ago
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆205Updated this week