Alternatives and similar repositories for pythostitcher

Users that are interested in pythostitcher are comparing it to the libraries listed below

• jlevy44 / PathFlow-MixMatch
  Don't mix, match! Simple utilities for improved registration of Histopathology Whole Slide Images.
  ☆11Updated 4 years ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆79Updated last week
• Booritas / slideio
  ☆70Updated last week
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆133Updated last year
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆73Updated this week
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆53Updated last year
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆34Updated last year
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆31Updated 7 months ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆22Updated last year
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆124Updated last week
• CBICA / HistoReg
  Framework for registration of sequential digitized histology slices
  ☆28Updated 3 years ago
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆72Updated 6 months ago
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆32Updated 4 years ago
• AICAN-Research / H2G-Net
  🚀 H2G-Net: Segmentation of breast cancer region from whole slide images
  ☆27Updated 8 months ago
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆33Updated last year
• ksugar / qupath-extension-sam
  QuPath extension for Segment Anything Model (SAM)
  ☆113Updated 4 months ago
• serrob23 / falsecolor
  FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytopla…
  ☆30Updated 4 years ago
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆24Updated 2 weeks ago
• daangeijs / simple_wsi_viewer
  A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
  ☆14Updated last year
• markowetzlab / slidl
  A Python library of pre- and post-processing tools for applying deep learning to whole-slide images
  ☆18Updated 2 years ago
• DIAGNijmegen / pathology-hooknet
  ☆62Updated 9 months ago
• SHIDCenter / PathoNet
  ☆35Updated 2 years ago
• DeepMIALab / AI-FFPE
  Deep Learning-based Frozen Section to FFPE Translation
  ☆59Updated 9 months ago
• navidstuv / NuClick
  Interactive Segmentation of Nucleus
  ☆63Updated 2 years ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆104Updated 7 months ago
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆166Updated 3 weeks ago
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆39Updated 3 weeks ago
• kevindehaan / stain-transformation
  ☆40Updated 3 years ago
• MWod / DeeperHistReg
  DeeperHistReg - Source Code
  ☆66Updated last year