KatherLab / STAMP
Solid Tumor Associative Modeling in Pathology
☆73Updated last week
Alternatives and similar repositories for STAMP:
Users that are interested in STAMP are comparing it to the libraries listed below
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆68Updated last year
- Tools to build deep learning pipelines.☆99Updated 5 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆60Updated 2 months ago
- List of pathology feature extractors and foundation models☆117Updated 2 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆81Updated 2 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆97Updated 6 months ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆123Updated 2 months ago
- ☆13Updated 2 months ago
- GrandQC tool for tissue detection and quality control in pathology☆40Updated last month
- Histopathology Image Analysis☆93Updated last year
- Histopathology Slides Preprocessing Pipeline☆36Updated last month
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆97Updated 3 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆26Updated last year
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆25Updated last year
- Efficient Approach for Guided Local Examination in Digital Pathology☆19Updated last month
- First commit☆61Updated 2 years ago
- Standardized benchmark for computational pathology foundation models.☆66Updated this week
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆36Updated 8 months ago
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆52Updated 2 months ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆19Updated 9 months ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 2 years ago
- ☆51Updated last year
- A pan-cancer platform for mutation prediction from routine histology☆68Updated 3 years ago
- ☆35Updated 2 years ago
- Pipeline for computational pathology☆34Updated last year
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆17Updated last month
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆29Updated 11 months ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆43Updated last year
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆39Updated 4 months ago
- A generative toolkit to translate H&E images to multiplexed IHC☆39Updated 4 months ago