KatherLab / STAMP
Solid Tumor Associative Modeling in Pathology
☆61Updated 2 weeks ago
Alternatives and similar repositories for STAMP:
Users that are interested in STAMP are comparing it to the libraries listed below
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆67Updated last year
- Tools to build deep learning pipelines.☆93Updated 3 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆92Updated 4 months ago
- Histopathology Image Analysis☆92Updated last year
- Multimodal prototyping for cancer survival prediction - ICML 2024☆72Updated last week
- List of pathology feature extractors and foundation models☆99Updated last month
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆97Updated last month
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆54Updated 3 weeks ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆117Updated last week
- Pipeline for computational pathology☆34Updated last year
- First commit☆61Updated 2 years ago
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆28Updated 9 months ago
- ☆49Updated last year
- ☆36Updated 2 years ago
- GrandQC tool for tissue detection and quality control in pathology☆29Updated last month
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆36Updated 6 months ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated 7 months ago
- A vision language model for gigapixel whole slide images in histopathology☆35Updated 5 months ago
- Histopathology Slides Preprocessing Pipeline☆36Updated 3 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆24Updated 10 months ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 2 years ago
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆44Updated last week
- ☆52Updated 3 years ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆35Updated 2 months ago
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆127Updated 3 months ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆17Updated 2 years ago
- TCGA Pathology Reports in Machine Readable Text☆37Updated 9 months ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated last year