daangeijs / simple_wsi_viewerLinks
A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
☆15Updated last year
Alternatives and similar repositories for simple_wsi_viewer
Users that are interested in simple_wsi_viewer are comparing it to the libraries listed below
Sorting:
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- ☆15Updated 7 months ago
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- ☆63Updated 11 months ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆31Updated 9 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆105Updated 9 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆25Updated 2 months ago
- Pipeline for computational pathology☆38Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆59Updated 3 years ago
- ☆20Updated 2 years ago
- Re-stained whole slide image alignment☆35Updated last year
- ☆12Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆80Updated last year
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆55Updated last year
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆69Updated 2 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆36Updated last year
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆33Updated 3 years ago
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆28Updated 4 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆43Updated last month
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆36Updated last year
- Awesome Domain Generalization for Computational Pathology☆18Updated 10 months ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆73Updated 8 months ago
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆62Updated 3 years ago
- An open-source digital pathology based rapid image annotation tool☆83Updated this week
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆105Updated 7 months ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆25Updated last year
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 5 years ago
- GPU-accelerated stain normalization command line tool☆22Updated last year