daangeijs / simple_wsi_viewerLinks
A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
☆15Updated 2 years ago
Alternatives and similar repositories for simple_wsi_viewer
Users that are interested in simple_wsi_viewer are comparing it to the libraries listed below
Sorting:
- ☆65Updated last year
- ☆15Updated 8 months ago
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated last week
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Updated 10 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆26Updated 3 months ago
- Pipeline for computational pathology☆38Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- Interactive Segmentation of Nucleus☆66Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆23Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆86Updated 3 weeks ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆82Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆69Updated 2 years ago
- Python 3 library for the augmentation & normalization of H&E images☆61Updated 3 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆43Updated 2 months ago
- A Girder plugin for pathology image annotations and analysis.☆75Updated 2 weeks ago
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆29Updated last year
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆36Updated last year
- Re-stained whole slide image alignment☆35Updated 2 years ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated last week
- ☆20Updated 2 years ago
- Awesome Domain Generalization for Computational Pathology☆18Updated 11 months ago
- Histopathology Image Analysis☆92Updated 2 years ago
- ☆13Updated last year
- A tool for rapidly labeling objects using deep learning feature embedding☆33Updated 2 months ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆55Updated 2 years ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆24Updated 3 years ago
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆28Updated 5 years ago