mchelali / Color-Deconvolution
Color Deconvolution for quantification of histological staining
☆10Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for Color-Deconvolution
- Re-stained whole slide image alignment☆31Updated last year
- ☆15Updated 2 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆15Updated last year
- Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.☆22Updated last year
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Updated 4 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆49Updated 4 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆19Updated 4 years ago
- A set of codes to classify H&E slides using deep learning☆28Updated 2 years ago
- Python scripts for automatic Whole-Slide Image preprocessing.☆35Updated 3 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆17Updated 5 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆65Updated last year
- Data and code to accompany our Nature publication☆43Updated 2 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆29Updated last year
- WSICS☆29Updated 5 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆18Updated 7 months ago
- Class for getting ROIs and masks from annotated pyramidal images. A work in progress.☆12Updated 3 years ago
- HCC_Deep_learning☆18Updated 4 years ago
- The Zhang's lab aims to provide a model or GUI of algorithm for example and further studies. ALL of them are used just for research, but…☆10Updated 4 years ago
- This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)☆66Updated 8 years ago
- ☆40Updated 2 years ago
- ☆30Updated 4 years ago
- Gene mutation and pathway activity prediction from H&E slides☆32Updated 2 years ago
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆32Updated 3 years ago
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆87Updated 4 years ago
- ☆45Updated 2 years ago
- Staining unmixing and normalization for histopathology images.☆46Updated 5 years ago
- Code from Foersch et al. (Under Construction / Development)☆35Updated last year
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆12Updated last year
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆100Updated 5 years ago