qupath / qupath-docsLinks
QuPath documentation
☆21Updated 2 months ago
Alternatives and similar repositories for qupath-docs
Users that are interested in qupath-docs are comparing it to the libraries listed below
Sorting:
- The official QuPath extension for InstanSeg☆29Updated 2 weeks ago
- QuPath extension to run StarDist nucleus detection☆48Updated 7 months ago
- QuPath extension to interactively align images☆26Updated 5 months ago
- ☆30Updated 2 weeks ago
- ☆24Updated 2 years ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆66Updated 2 months ago
- Histology Topography Cytometry Analysis Toolbox☆69Updated 3 months ago
- Integrated pipeline for multiplexed image analysis☆102Updated 3 weeks ago
- Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue image…☆55Updated last year
- ☆27Updated 7 months ago
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆52Updated 5 years ago
- Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images☆23Updated 2 weeks ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆63Updated last year
- Multiple-choice microscopy pipeline☆145Updated last week
- Accessible and interoperable whole slide image analysis☆181Updated 2 weeks ago
- Subpopulation detection in high-dimensional single-cell data☆73Updated 5 years ago
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- A Python library for deep learning on whole-slide images☆52Updated 4 years ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆31Updated 3 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆28Updated 2 months ago
- An introduction to deepcell and deep learning☆156Updated last year
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 5 years ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆49Updated 8 months ago
- ☆41Updated last week
- The Single-Cell Pathology Landscape of Breast Cancer☆27Updated 6 years ago
- ☆63Updated 5 months ago
- Train a model to predict gene expression from histology slides.☆112Updated 3 years ago
- Probabilistic topic model for identifying cellular micro-environments.☆28Updated 2 years ago
- ☆32Updated 5 years ago
- A pixel classification based multiplexed image segmentation pipeline☆105Updated 2 years ago