Quantification module for mcmicro
☆11Apr 1, 2025Updated last year
Alternatives and similar repositories for quantification
Users that are interested in quantification are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RAPID: a Real-time, GPU-Accelerated Parallelized Image processing software for large-scale multiplexed fluorescence microscopy Data☆12Dec 3, 2022Updated 3 years ago
- Multiple-choice microscopy pipeline☆156Oct 17, 2026Updated last week
- Segmentation error aware clustering for multiplexed imaging☆19Jan 9, 2025Updated last year
- An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.☆36Oct 8, 2026Updated 2 weeks ago
- Mixed-effect model to test differences in cell type proportions from single-cell data, in Python☆10Aug 6, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- RAnking Markers for CEll Segmentation☆12Feb 22, 2022Updated 4 years ago
- A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.☆10Apr 19, 2024Updated 2 years ago
- ☆73Jan 18, 2023Updated 3 years ago
- ☆27Aug 27, 2026Updated 2 months ago
- A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)☆14Oct 16, 2026Updated last week
- Trained only with subject-level labels, NaroNet discovers phenotypes, neighborhoods, and areas with the highest influence when classifyin…☆21Dec 27, 2023Updated 2 years ago
- Spatial Single-Cell Analysis Toolkit☆116Oct 12, 2026Updated 2 weeks ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆57Sep 2, 2026Updated last month
- ☆30Oct 4, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A slimmed down version of scran, based on the C++ library of the same name.☆10Oct 15, 2024Updated 2 years ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated last year
- A Deep LSTM-CNN-HMM Neural Network system for Speaker Identification☆12Mar 14, 2023Updated 3 years ago
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- Nextflow pipeline to do protein design tasks at the end of 2025.☆12Sep 29, 2026Updated 3 weeks ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆67Mar 14, 2024Updated 2 years ago
- ☆28Oct 12, 2024Updated 2 years ago
- Code used to benchmark Xenium☆88Apr 10, 2026Updated 6 months ago
- S3 Proxy Service☆13Sep 17, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Feature extraction and linking of multiplexing data.☆13Oct 13, 2026Updated 2 weeks ago
- Use dimensionality reduction to create thumnails for high-dimensional imaging☆12May 21, 2026Updated 5 months ago
- QuPath documentation☆24Sep 8, 2026Updated last month
- package for analysis of ligand and receptor connectivity between populations in scRNA-seq data☆13May 20, 2022Updated 4 years ago
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆43Oct 19, 2026Updated last week
- Statistical quality evaluation of dimensionality reduction algorithms☆30Dec 17, 2025Updated 10 months ago
- ctDNA Analysis pipeline. Version 1.0.0☆17Dec 1, 2025Updated 10 months ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆55Feb 4, 2025Updated last year
- Build contrasts for models defined with formulaic☆13Oct 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆182Aug 7, 2026Updated 2 months ago
- UniCell Deconvolve Paper☆10Apr 25, 2023Updated 3 years ago
- kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical Trials☆15May 27, 2025Updated last year
- Optimal gating strategies for flow and mass cytometry.☆16Jul 22, 2026Updated 3 months ago
- BEER: Batch EffEct Remover for single-cell data☆26Jan 9, 2025Updated last year
- ☆42Oct 18, 2026Updated last week
- ☆107Oct 20, 2026Updated last week