stephaniehicks / bioconductorNotesLinks
My notes/usage examples for various Bioconductor packages
☆15Updated 8 years ago
Alternatives and similar repositories for bioconductorNotes
Users that are interested in bioconductorNotes are comparing it to the libraries listed below
Sorting:
- Functional enrichment analysis of high-throughput omics data☆20Updated 6 months ago
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆78Updated 2 months ago
- 2018 Bioconductor Workshops☆76Updated 6 years ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆90Updated 4 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆64Updated 3 weeks ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 3 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Topics In Data Science and Bioinformatics☆78Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated this week
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated last year
- Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…☆73Updated 2 weeks ago
- MSigDB gene sets for multiple organisms in a tidy data format☆79Updated last week
- Differential Correlation across Ranked Samples☆12Updated 2 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated 2 weeks ago
- Clone of the Bioconductor repository for the scater package.☆96Updated 4 months ago
- Project Website:☆54Updated 3 weeks ago
- An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…☆109Updated 8 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆45Updated 4 years ago
- Introduction to Computational Biology☆32Updated 8 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆30Updated 2 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- Devel repository for minfi☆61Updated last year