My notes/usage examples for various Bioconductor packages
☆15Jan 9, 2017Updated 9 years ago
Alternatives and similar repositories for bioconductorNotes
Users that are interested in bioconductorNotes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆19Jun 13, 2024Updated 2 years ago
- Display news and update outdated github R packages☆24Jul 12, 2021Updated 5 years ago
- Single cell network synthesis toolkit☆23Feb 15, 2021Updated 5 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆15Dec 3, 2018Updated 7 years ago
- Analysis tools for longevity research☆24Jul 23, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Course website for Johns Hopkins BSPH Statistical Computing (Biostatistics 140.776)☆10Oct 1, 2026Updated last week
- Subsampling of high-throughput sequencing count data☆20May 10, 2019Updated 7 years ago
- ☆20Jul 6, 2021Updated 5 years ago
- Quick Read Quality Control☆20Feb 28, 2023Updated 3 years ago
- A python package for simulation and analysis of dynamic Boolean network models☆11Jan 23, 2019Updated 7 years ago
- Issue tracker for the Open Targets Platform☆13Jul 8, 2025Updated last year
- An R Shiny module to put swiping interfaces in your app!☆13Mar 29, 2017Updated 9 years ago
- ☆13May 29, 2024Updated 2 years ago
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆25Jul 6, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Finite-size corrections of defect energy levels involving ionic polarization☆11Oct 20, 2022Updated 3 years ago
- ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps☆23Oct 12, 2017Updated 8 years ago
- easy access to benchmark datasets☆51Aug 17, 2018Updated 8 years ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Jul 1, 2016Updated 10 years ago
- Create equal-area histograms with 'ggplot2'☆10Jul 23, 2023Updated 3 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated 6 months ago
- Install, Update, Load Packages from CRAN, Bioconductor, and GitHub in One Step.☆54Dec 28, 2024Updated last year
- R语言代谢组学数据分析☆12Feb 29, 2016Updated 10 years ago
- Bayesian network modelling of mutational interactions identifies novel cancer subgroups☆15May 10, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Matlab implementation of the Elastic Principal Graphs (ElPiGraph) method☆14Dec 6, 2022Updated 3 years ago
- R package for WikiPathways API☆20Nov 3, 2025Updated 11 months ago
- fastqcr: Quality Control of Sequencing Data☆78Aug 3, 2023Updated 3 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Dec 16, 2019Updated 6 years ago
- a clever bot to rate and improve your ggplot plot √☆12Jan 12, 2019Updated 7 years ago
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated 2 years ago
- OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning …☆36Jul 21, 2026Updated 2 months ago
- BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data☆14Jun 14, 2026Updated 3 months ago
- countsimQC - Compare characteristic features of count data sets☆31Apr 28, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Normalization for single cell RNA-seq data☆11Aug 25, 2022Updated 4 years ago
- ☆11Sep 5, 2018Updated 8 years ago
- Python Client Package for WikiPathways☆28Sep 8, 2026Updated last month
- A color palette for a movie set in space☆13Oct 10, 2017Updated 9 years ago
- Read in Xenium, CosMx, Vizgen, STARmap PLUS, seqFISH data as Spatial or SingleCell Experiment object.☆19Sep 19, 2025Updated last year
- Weekly workshops to prepare for the competition☆11Jul 5, 2018Updated 8 years ago
- A Shiny app for finding beginner GitHub issues to contribute to☆12Apr 27, 2017Updated 9 years ago