Alternatives and similar repositories for bioconductorNotes

Users that are interested in bioconductorNotes are comparing it to the libraries listed below

• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated this week
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆79Updated last month
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆88Updated 5 years ago
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆37Updated 2 years ago
• waldronlab / enrichOmics
  Functional enrichment analysis of high-throughput omics data
  ☆20Updated 10 months ago
• LTLA / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆29Updated last week
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆76Updated 6 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆24Updated 2 years ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆38Updated 2 weeks ago
• waldronlab / data-science-seminar
  Topics In Data Science and Bioinformatics
  ☆79Updated last year
• hansenlab / minfi
  Devel repository for minfi
  ☆61Updated last year
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆68Updated 2 weeks ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 5 years ago
• Bioconductor / BiocParallel
  Bioconductor facilities for parallel evaluation
  ☆68Updated 2 weeks ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 11 months ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆43Updated 2 weeks ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated 2 months ago
• biodatascience / compbio_src
  Introduction to Computational Biology - source Rmarkdown files
  ☆63Updated last year
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆83Updated 3 months ago
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆30Updated last year
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆24Updated 4 months ago
• shazanfar / DCARS
  Differential Correlation across Ranked Samples
  ☆12Updated 2 years ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated last week
• cran / WGCNA
   This is a read-only mirror of the CRAN R package repository. WGCNA — Weighted Correlation Network Analysis
  ☆54Updated last year
• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆67Updated last week
• LTLA / SingleCellThoughts
  Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
  ☆47Updated 2 months ago
• alanocallaghan / scater
  Clone of the Bioconductor repository for the scater package.
  ☆96Updated 8 months ago
• Shians / Glimma
  Glimma R package
  ☆50Updated last year
• mikelove / deseq2_or_edger
  DESeq2 or edgeR
  ☆22Updated 9 years ago
• YuLab-SMU / ReactomePA
  Reactome Pathway Analysis
  ☆43Updated 7 months ago