My notes/usage examples for various Bioconductor packages
☆15Jan 9, 2017Updated 9 years ago
Alternatives and similar repositories for bioconductorNotes
Users that are interested in bioconductorNotes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆18Jun 13, 2024Updated last year
- Display news and update outdated github R packages☆24Jul 12, 2021Updated 4 years ago
- Subsampling of high-throughput sequencing count data☆20May 10, 2019Updated 7 years ago
- Single cell network synthesis toolkit☆23Feb 15, 2021Updated 5 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Analysis tools for longevity research☆22Jul 23, 2017Updated 8 years ago
- A cross-package Bioconductor workflow for analysing methylation array data☆11Mar 31, 2017Updated 9 years ago
- ☆20Jul 6, 2021Updated 4 years ago
- Issue tracker for the Open Targets Platform☆13Jul 8, 2025Updated 11 months ago
- An R Shiny module to put swiping interfaces in your app!☆13Mar 29, 2017Updated 9 years ago
- A pipeline for Human GWAS analysis that accomodates both Affymetrix (raw .CEL files) and Illumina (Plink binaries) data☆13May 14, 2018Updated 8 years ago
- ☆12May 29, 2024Updated 2 years ago
- ☆23Nov 28, 2025Updated 6 months ago
- Finite-size corrections of defect energy levels involving ionic polarization☆10Oct 20, 2022Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- CryoBoltz code for protein structure prediction with cryo-EM guidance. NeurIPS 2025.☆37Nov 30, 2025Updated 6 months ago
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆25Jul 6, 2021Updated 4 years ago
- A python package for simulation and analysis of dynamic Boolean network models☆11Jan 23, 2019Updated 7 years ago
- ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps☆23Oct 12, 2017Updated 8 years ago
- easy access to benchmark datasets☆50Aug 17, 2018Updated 7 years ago
- R package for WikiPathways API☆20Nov 3, 2025Updated 7 months ago
- Codebase for SigmaDock: Untwisting Molecular Docking with SE(3) Fragmented Diffusion☆85Apr 7, 2026Updated 2 months ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Jul 1, 2016Updated 9 years ago
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆25May 12, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Create equal-area histograms with 'ggplot2'☆10Jul 23, 2023Updated 2 years ago
- R语言代谢组学数据分析☆12Feb 29, 2016Updated 10 years ago
- Install, Update, Load Packages from CRAN, Bioconductor, and GitHub in One Step.☆54Dec 28, 2024Updated last year
- Bayesian network modelling of mutational interactions identifies novel cancer subgroups☆15May 10, 2021Updated 5 years ago
- Matlab implementation of the Elastic Principal Graphs (ElPiGraph) method☆14Dec 6, 2022Updated 3 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Dec 16, 2019Updated 6 years ago
- countsimQC - Compare characteristic features of count data sets☆30Apr 28, 2026Updated last month
- BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data☆14Jan 3, 2023Updated 3 years ago
- This repository contains a reciprocal BLAST program for filtering down BLAST results to best bidirectional hits. It also contains a toolk…☆17Jan 16, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Prediction of Antibody CDR and protein loop flexibility☆17Sep 17, 2025Updated 8 months ago
- a clever bot to rate and improve your ggplot plot √☆12Jan 12, 2019Updated 7 years ago
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated 2 years ago
- fastqcr: Quality Control of Sequencing Data☆78Aug 3, 2023Updated 2 years ago
- OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning …☆35Jun 4, 2026Updated last week
- Normalization for single cell RNA-seq data☆10Aug 25, 2022Updated 3 years ago
- ☆11Sep 5, 2018Updated 7 years ago