elixir-europe / BioHackathon-projects-2019
This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage projects, publish materials, create code, etc.
☆24Updated 3 years ago
Alternatives and similar repositories for BioHackathon-projects-2019:
Users that are interested in BioHackathon-projects-2019 are comparing it to the libraries listed below
- ☆19Updated 2 years ago
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Updated 3 years ago
- X things you should take into consideration if you code for big data analysis☆23Updated 6 years ago
- A fast tool to convert BioJS components into Galaxy visualization plugins.☆14Updated 4 years ago
- ☆13Updated 7 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 5 months ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- A metadata commons to store research software metadata☆41Updated this week
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Updated 6 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 7 months ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- iDEP: integrated Differential Expression & Pathway analysis☆15Updated 6 years ago
- Docker image of JBrowse Genome Browser☆15Updated 3 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆28Updated 6 years ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 6 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- AOE (All Of gene Expression): Index and meta-analysis of gene expression data that works☆11Updated 2 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Updated 10 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- ☆24Updated 4 years ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆24Updated 7 months ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago
- The snakemake interface, currently works like a notebook (under development)☆18Updated 3 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- cache packages permanently☆13Updated 8 months ago