elixir-europe / BioHackathon-projects-2019
This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage projects, publish materials, create code, etc.
☆24Updated 3 years ago
Alternatives and similar repositories for BioHackathon-projects-2019:
Users that are interested in BioHackathon-projects-2019 are comparing it to the libraries listed below
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Updated 3 years ago
- ☆19Updated 2 years ago
- X things you should take into consideration if you code for big data analysis☆24Updated 6 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 3 months ago
- A fast tool to convert BioJS components into Galaxy visualization plugins.☆14Updated 4 years ago
- Managing metadata and policy around metadata in NMDC☆2Updated 8 months ago
- An easy-to-use way for running Galaxy workflows.☆20Updated 5 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 5 years ago
- A metadata commons to store research software metadata☆40Updated this week
- biotoolsSchema : Tool description data model for computational tools in life sciences☆37Updated 11 months ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 3 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago
- SODAR: System for Omics Data Access and Retrieval☆15Updated last week
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 3 years ago
- Repo for downloading and storing OMIM data☆18Updated 8 years ago
- CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens☆19Updated 5 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last week
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆20Updated this week
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Updated 2 years ago
- BioThings API framework - Making high-performance API for biological annotation data☆46Updated this week
- Project Manager for NGS data analysis☆29Updated 2 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- List of tools included in https://usegalaxy.eu☆26Updated this week
- Universal RObust Peak Annotator☆15Updated last year
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 2 years ago
- ☆24Updated 4 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago