psoerensen / qggLinks
Statistical tools for Quantitative Genetic Analyses
☆38Updated last month
Alternatives and similar repositories for qgg
Users that are interested in qgg are comparing it to the libraries listed below
Sorting:
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆49Updated 6 months ago
- R package to perform Bayesian Genome-Wide Association Studies☆40Updated last year
- Manhattan++☆28Updated last year
- Make LocusZoom-like plots with your own LD matrix.☆44Updated 3 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 9 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated 11 months ago
- Quality control steps for GWAS☆24Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 3 months ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 7 months ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Sequence kernel association test (SKAT)☆52Updated last month
- Colocalization analysis of genetic association signals☆54Updated 3 months ago
- Cross-population fine-mapping☆37Updated 9 months ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated 2 years ago
- GitHub site to accompany Textbook Introduction to Statistical Genetic Data Analysis☆30Updated 5 years ago
- Generalized linear Mixed Model Association Tests☆44Updated last year
- ☆62Updated 3 years ago
- ☆16Updated 4 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆40Updated 2 years ago
- Enhanced version of the FastQTL QTL mapper☆68Updated 2 years ago
- TWAS-pipeline☆23Updated 4 years ago
- ☆23Updated 2 months ago
- Scripts for implementing the Tractor pipeline☆51Updated 3 weeks ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated last week
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆37Updated last year
- QTL Discovery using Annotations☆26Updated 2 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- ☆23Updated 4 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆85Updated 3 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago