psoerensen / qggLinks
Statistical tools for Quantitative Genetic Analyses
☆37Updated last week
Alternatives and similar repositories for qgg
Users that are interested in qgg are comparing it to the libraries listed below
Sorting:
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆45Updated 3 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆66Updated 8 months ago
- Make LocusZoom-like plots with your own LD matrix.☆40Updated 2 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆40Updated last year
- Sequence kernel association test (SKAT)☆50Updated 4 months ago
- Manhattan++☆28Updated last year
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last week
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆38Updated 6 months ago
- Generalized linear Mixed Model Association Tests☆42Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- Colocalization analysis of genetic association signals☆53Updated last week
- Quality control steps for GWAS☆23Updated last year
- GitHub site to accompany Textbook Introduction to Statistical Genetic Data Analysis☆28Updated 5 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆31Updated 3 weeks ago
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- Enhanced version of the FastQTL QTL mapper☆66Updated 2 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated last month
- Cross-population fine-mapping☆37Updated 6 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆93Updated 4 months ago
- ☆15Updated 4 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- ☆35Updated 4 years ago
- ☆30Updated 3 years ago
- R package for quality control of plink genetic datasets☆59Updated 2 weeks ago
- methods for functional summary-based imputation☆85Updated 3 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆52Updated 6 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- QTL Discovery using Annotations☆25Updated 2 years ago
- Main ricopili repo for public releases☆48Updated 2 months ago