MPI-Dortmund / pymissenseLinks
PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
☆23Updated 2 years ago
Alternatives and similar repositories for pymissense
Users that are interested in pymissense are comparing it to the libraries listed below
Sorting:
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 5 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆86Updated last month
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago
- ☆54Updated 4 months ago
- Direct coupling analysis software for protein and RNA sequences☆53Updated 5 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆110Updated last month
- ☆46Updated last year
- ☆31Updated last year
- ☆37Updated 6 months ago
- A domain parser for Alphafold models☆46Updated 2 years ago
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 4 months ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 3 years ago
- Contact map alignment☆41Updated 4 years ago
- Set of useful HADDOCK utility scripts☆56Updated 3 months ago
- ColabFold protocol☆57Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆117Updated last year
- ☆33Updated last year
- Fast indexing and search of discontinuous motifs in protein structures☆108Updated this week
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Evolutionary conservation estimation of residues or nucleotides☆56Updated 3 years ago
- Python package to manage protein structures and their annotations☆45Updated last year
- Graph Network for protein-protein interface including language model features☆34Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆29Updated 9 months ago
- ☆88Updated last year
- Fast protein structure searching or your money back☆118Updated 2 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆67Updated last year
- Kuhlman Lab Installation of AlphaFold3☆37Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆43Updated 7 months ago