MPI-Dortmund / pymissense
PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
☆23Updated last year
Alternatives and similar repositories for pymissense:
Users that are interested in pymissense are comparing it to the libraries listed below
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆52Updated 2 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆81Updated 10 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 2 months ago
- ☆49Updated 8 months ago
- A domain parser for Alphafold models☆34Updated last year
- ☆82Updated last year
- ☆28Updated last year
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆34Updated 2 years ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆41Updated last month
- ☆30Updated 11 months ago
- ColabFold protocol☆48Updated 3 months ago
- ☆34Updated 3 months ago
- ☆25Updated 8 months ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 2 years ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆84Updated 6 months ago
- Evolutionary conservation estimation of residues or nucleotides☆34Updated 2 years ago
- Contact map alignment☆41Updated 4 years ago
- Python package to manage protein structures and their annotations☆42Updated 11 months ago
- Python framework for doing ancestral sequence reconstruction☆37Updated 7 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆32Updated 2 years ago
- Transmembrane proteins predicted through Language Model embeddings☆33Updated 3 weeks ago
- Fast protein structure searching or your money back☆95Updated this week
- ☆31Updated 4 months ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆32Updated 4 months ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆82Updated 5 months ago
- Set of useful HADDOCK utility scripts☆51Updated 5 months ago
- Mutation effects predicted from sequence co-variation☆63Updated 7 years ago
- ☆22Updated last year
- Direct coupling analysis software for protein and RNA sequences☆50Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆119Updated 2 weeks ago