Alternatives and similar repositories for pymol-open-source-feedstock:

Users that are interested in pymol-open-source-feedstock are comparing it to the libraries listed below

• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆53Updated 3 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated 11 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆34Updated last year
• jcheongs / alphafold-multimer
  ☆28Updated 3 years ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆42Updated 2 months ago
• tymor22 / tm-vec
  ☆65Updated 5 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆51Updated 11 months ago
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆31Updated 8 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 9 months ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆49Updated 5 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆32Updated 2 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 3 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆87Updated 6 months ago
• BernhoferM / TMbed
  Transmembrane proteins predicted through Language Model embeddings
  ☆33Updated last month
• kWeissenow / EMBER2
  Alignment-free structure prediction using protein language models
  ☆22Updated 2 years ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆95Updated last month
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆48Updated 3 months ago
• ml4bio / Dense-Homolog-Retrieval
  Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
  ☆101Updated 6 months ago
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆67Updated 3 months ago
• JudeWells / chainsaw
  ☆32Updated 5 months ago
• mattarnoldbio / alphapickle
  ☆31Updated last year
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆34Updated last year
• akiyamalab / MEGADOCK
  An ultra-high-performance protein-protein docking for heterogeneous supercomputers
  ☆55Updated last year
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆87Updated 7 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆33Updated 3 months ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆50Updated last year
• elaspic / elaspic2
  Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…
  ☆20Updated 3 years ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆27Updated this week
• Wang-Lin-boop / GetPDB
  Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…
  ☆41Updated 7 months ago