stebliankin / pistonLinks
Evaluating Protein Binding Interfaces with Transformer Networks
☆47Updated last year
Alternatives and similar repositories for piston
Users that are interested in piston are comparing it to the libraries listed below
Sorting:
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆43Updated 8 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆117Updated 2 months ago
- ☆77Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆70Updated 2 weeks ago
- ☆92Updated 10 months ago
- Official repository of GENzyme☆54Updated 9 months ago
- ☆42Updated last year
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆70Updated 3 weeks ago
- Code for humanization of antibody and nanobody☆49Updated 9 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆83Updated 2 months ago
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆34Updated 2 years ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated last year
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆26Updated 2 years ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆99Updated this week
- ☆28Updated last year
- workflow used to prepare PPB-Affinity database☆27Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆34Updated last week
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆54Updated last year
- ☆65Updated last year
- ☆107Updated 2 years ago
- Making Protein folding accessible to all!☆22Updated last year
- ☆76Updated 6 months ago
- Interpretable AI pipeline improving binding predictions for novel protein targets and ligands☆40Updated last year
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆141Updated last week
- Diffusion model based protein-ligand flexible docking method☆110Updated 10 months ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆46Updated 7 months ago
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆15Updated last year
- ☆61Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 9 months ago