Alternatives and similar repositories for piston

Users that are interested in piston are comparing it to the libraries listed below

• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆124Updated 4 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆66Updated 3 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆58Updated 2 months ago
• CAODH / EquiScore
  ☆77Updated last year
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆45Updated 10 months ago
• danny305 / StabilityOracle
  ☆29Updated 3 weeks ago
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆83Updated last year
• hongliangduan / HighFold
  ☆33Updated last year
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆45Updated 11 months ago
• liuyf020419 / SCUBA-D
  ☆62Updated last year
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆55Updated 11 months ago
• wengong-jin / DSMBind
  ☆94Updated last year
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆76Updated 2 months ago
• tiantz17 / PocketAnchor
  Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction
  ☆35Updated 2 years ago
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆28Updated last year
• bunzela / AIzymes
  ☆60Updated last week
• zhengkangjie / ESM-AA
  ☆76Updated 8 months ago
• kxz18 / PepMimic
  Official repository for the paper "Peptide design through binding interface mimicry with PepMimic" accepted by Nature Biomedical Engineer…
  ☆18Updated last week
• Gonglab-THU / SPIRED-Fitness
  ☆44Updated 4 months ago
• ELELAB / RosettaDDGPrediction
  ☆78Updated 8 months ago
• briandasantini / cPEPmatch
  Tool to design cyclic peptides that mimic proteins and target their binding partners.
  ☆16Updated last year
• huhlim / alphafold-multistate
  ☆42Updated last year
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆27Updated 2 years ago
• KexinZhangResearch / PhysDock
  Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction
  ☆82Updated 3 weeks ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆34Updated last month
• alexechu / protpardelle
  ☆65Updated 2 years ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 4 years ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆86Updated 4 months ago
• anirudhvenk / antibody-dpo
  ☆24Updated 5 months ago