Alternatives and similar repositories for AbX

Users that are interested in AbX are comparing it to the libraries listed below

• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆88Updated 5 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆77Updated 3 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆46Updated 2 weeks ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆63Updated 2 months ago
• EDAPINENUT / GeoAB
  This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)
  ☆42Updated last year
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆41Updated last year
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆95Updated 11 months ago
• Immortals-33 / Scaffold-Lab
  A comprehensive benchmark on the performances of multiple protein backbone generative models.
  ☆64Updated 5 months ago
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆25Updated 3 months ago
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆43Updated 2 weeks ago
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆55Updated 11 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆48Updated last month
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated last year
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆41Updated 7 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆57Updated 6 months ago
• ChenPy00 / PPB-Affinity
  Baseline model for PPB-Affinity benchmark data
  ☆31Updated 6 months ago
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆69Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 8 months ago
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆28Updated last year
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆84Updated last year
• liuyf020419 / SCUBA-D
  ☆62Updated last year
• ai4protein / ProtSSN
  🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…
  ☆78Updated 6 months ago
• JoreyYan / Originflow
  ☆19Updated 6 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• Kuhlman-Lab / evopro
  ☆91Updated last month
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆46Updated 11 months ago
• wallnerlab / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆54Updated 2 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆46Updated 2 years ago