CarbonMatrixLab / AbX
Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints
☆25Updated last month
Alternatives and similar repositories for AbX:
Users that are interested in AbX are comparing it to the libraries listed below
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆48Updated last week
- Fast deep learning methods for large-scale protein-protein interaction screening☆34Updated 4 months ago
- ☆61Updated 2 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆56Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆38Updated last week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- Adapting protein language models for structure-conditioned design☆35Updated 6 months ago
- ☆31Updated last year
- ☆25Updated 2 weeks ago
- Structure-conditioned masked language modeling for protein sequence design☆61Updated last year
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 7 months ago
- ☆26Updated 2 years ago
- ☆36Updated last year
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion.☆34Updated last month
- Inference code for Bio-Inspired Antibody Language Model☆23Updated 5 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated 8 months ago
- Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model☆16Updated 3 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆35Updated 3 months ago
- ☆14Updated 8 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆41Updated 2 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆24Updated 7 months ago
- Baseline model for PPB-Affinity benchmark data☆19Updated 2 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated last month
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆31Updated 3 months ago
- ☆33Updated 5 months ago
- Tool for modelling the CDRs of antibodies☆32Updated 2 years ago
- ☆20Updated last month
- ☆18Updated 3 months ago