☆29Apr 13, 2026Updated 3 months ago
Alternatives and similar repositories for rhopca
Users that are interested in rhopca are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆26Jun 9, 2026Updated last month
- ☆31May 19, 2026Updated 2 months ago
- ☆19Jun 3, 2026Updated 2 months ago
- Repository for edgePython which is a Python implementation of the Bioconductor edgeR package for differential analysis of genomics count …☆90Jun 17, 2026Updated last month
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆21Nov 27, 2025Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Model-based Dimensionality Reduction for Single-cell RNA-seq with Generalized Bilinear Models☆17Jul 29, 2025Updated last year
- Compute the neighborhood consolidation matrix and identify SHRs☆15Jun 12, 2025Updated last year
- scVI extension for unspliced RNA☆15May 18, 2025Updated last year
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- ☆12Aug 30, 2024Updated last year
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated last year
- A rust implementation of STAR☆68Updated this week
- Examples for gget (https://github.com/pachterlab/gget).☆40Feb 20, 2026Updated 5 months ago
- Identification of spatial homogeneous regions☆21Oct 6, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆26Jul 15, 2026Updated 3 weeks ago
- ☆32Jun 21, 2026Updated last month
- Toolbox for single-cell data analysis on sample level☆25Updated this week
- Flexible, scalable, QTL analyses using generalized linear models implemented in JAX☆19Jun 24, 2026Updated last month
- Genotype-Neighborhood Associations: A tool for identifying genetic variant associations to the abundance of cell states in single-cell d…☆18Oct 5, 2024Updated last year
- eqtl analysis pipeline using tensorqtl, saige-qtl, LIMIX, quasar and jaxQTL☆17Feb 3, 2026Updated 6 months ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆16Jan 26, 2026Updated 6 months ago
- Universal Single-Cell Genomics Preprocessing package☆51Jul 29, 2026Updated last week
- Annotatability, a method to identify meaningful patterns in single-cell genomics data through annotation-trainability analysis, which est…☆19Jun 23, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Fast and scalable inference for single-cell differential gene expression of multiple patients☆15Jul 3, 2026Updated last month
- ☆14Apr 20, 2023Updated 3 years ago
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆68Updated this week
- ☆13Jun 15, 2024Updated 2 years ago
- The Monod package fits CME models to sequencing data.☆35Apr 24, 2026Updated 3 months ago
- ☆13Aug 30, 2025Updated 11 months ago
- Minipoa: A minimizer-based method for fast and memory-efficient partial order alignment☆18May 23, 2026Updated 2 months ago
- ☆13Dec 14, 2023Updated 2 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆15Feb 23, 2026Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A python package for chromVAR☆34May 1, 2023Updated 3 years ago
- ☆38Jun 8, 2026Updated last month
- materials and website for the 2016 kallisto sleuth workshop☆11Nov 7, 2016Updated 9 years ago
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆72Updated this week
- Illico is a python library performing fast and lightweight wilcoxon rank-sum tests for single-cell RNASeq.☆21Jul 30, 2026Updated last week
- ☆21Mar 2, 2026Updated 5 months ago
- R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data☆23Jul 21, 2026Updated 2 weeks ago