☆15Mar 25, 2016Updated 10 years ago
Alternatives and similar repositories for ProteinEvolutionToolbox
Users that are interested in ProteinEvolutionToolbox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Computational biology utility scripts☆19Apr 16, 2025Updated last year
- An elegant and simple way to upload iGEM Wikis.☆14Oct 20, 2021Updated 4 years ago
- Temporal Pathway Synthesizer☆17Jun 28, 2024Updated 2 years ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated last year
- The AiGEM software suite of Team Heidelberg 2017☆15Apr 17, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Contrastive learning of protein representations with graph neural networks for structural and functional annotations☆11Apr 23, 2023Updated 3 years ago
- A curated list of useful bioinformatics and computational biology tools, sorted by category.☆58Apr 29, 2015Updated 11 years ago
- A python script to perform QM/MM calculation.☆13Jul 7, 2026Updated 2 weeks ago
- Conservation analysis of homologous proteins with Python☆13Jul 11, 2021Updated 5 years ago
- An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al☆26Jul 15, 2024Updated 2 years ago
- Degenerate Codon Design☆13Feb 13, 2020Updated 6 years ago
- Master thesis work: explaining deep reinforcement learning policies☆10Aug 27, 2020Updated 5 years ago
- ☆15Jun 26, 2018Updated 8 years ago
- Automated construction of protein chimeras and their analysis.☆15Sep 29, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A Python workflow to study protein-protein coevolution and interaction☆21Jun 30, 2017Updated 9 years ago
- iGem Marburg 2019☆21Dec 7, 2019Updated 6 years ago
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Mar 7, 2022Updated 4 years ago
- Guiding directed protein evolution with Bayesian Optimization - First Steps☆16Sep 13, 2020Updated 5 years ago
- ☆21Jul 12, 2016Updated 10 years ago
- Applied Quantitative Methods course at the College of Charleston☆21Apr 2, 2026Updated 3 months ago
- ProteomeLM: A proteome-scale language model allowing fast prediction of protein-protein interactions and gene essentiality across taxa☆36Jun 10, 2026Updated last month
- profile the repeat landscape in a genome☆16Sep 9, 2014Updated 11 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆62Apr 8, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆15Jan 23, 2026Updated 6 months ago
- This is the GPress, a framework for querying GTF, GFF3 and expression files in a compressed form.☆11Oct 5, 2023Updated 2 years ago
- Plos in Computational Biology paper related with github for researchers, code, source and document☆60Jul 14, 2016Updated 10 years ago
- STRIDE: Species Tree Root Inference from Gene Duplication Events☆10Aug 28, 2018Updated 7 years ago
- A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)☆13Mar 12, 2018Updated 8 years ago
- A transposition caller.☆12Oct 5, 2023Updated 2 years ago
- Greening lab hydrogenase database☆18Jun 26, 2025Updated last year
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 11 years ago
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Mar 5, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- Simulating genealogies using charged particles☆31Apr 21, 2015Updated 11 years ago
- Several QM/MM tutorials for biological simulations adapted to CP2K. Tutorials adapted from AMBER, GMX, NAMD and CPMD softwares.☆26Oct 18, 2019Updated 6 years ago
- Repository for collective design of an iGEM DNA distribution☆44Apr 7, 2023Updated 3 years ago
- ☆22Mar 22, 2021Updated 5 years ago
- Embeddings to Network Alignment - align biological networks between two species☆10Sep 8, 2023Updated 2 years ago
- Simple Python program to perform codon optimization or heterology calculations.☆12Apr 13, 2021Updated 5 years ago