iseekwonderful / PyPathway
A python package for pathway visualization
☆38Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for PyPathway
- A 3-Dimensional View of Human Metabolism and Disease☆25Updated 6 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆61Updated 3 years ago
- This is the public repository for the EPIC tool.☆17Updated 2 years ago
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆17Updated 4 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 7 years ago
- predicting peptide and TCR interaction☆20Updated 3 years ago
- A simple pythonic interface to biomart.☆55Updated 4 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 2 years ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆35Updated 7 years ago
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆83Updated 2 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- Python biomart API☆63Updated last year
- Python interface to amino acid properties and IEDB☆49Updated last month
- Python package to plot sequence logos☆29Updated last year
- Parsing tools for GTF (gene transfer format) files☆110Updated 7 months ago
- A Python package for gene network analysis☆32Updated 2 years ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆48Updated 2 years ago
- MyGene.info: A BioThings API for gene annotations☆117Updated 2 weeks ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆34Updated 2 years ago
- Downloader for ENCODE☆31Updated 4 years ago
- Concise: Keras extension for regulatory genomics☆34Updated last year
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆33Updated 3 weeks ago
- ☆38Updated 11 months ago
- Prize-Collecting Steiner Forests for Interactomes☆54Updated 5 months ago
- Visualization and analysis platform for metabolic data and network pattern recognition☆38Updated last week
- Code and data used in The Great Repertoire Project☆29Updated 3 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆48Updated 5 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆38Updated 3 weeks ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆41Updated this week