nf-core / epitopepredictionLinks
A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
☆48Updated 3 weeks ago
Alternatives and similar repositories for epitopeprediction
Users that are interested in epitopeprediction are comparing it to the libraries listed below
Sorting:
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated last month
- HLA-II ligand predictor.☆44Updated 2 years ago
- Comprehensive Python client for the Uniprot REST API☆51Updated 2 months ago
- PRedictor of IMmunogenic Epitopes☆24Updated 3 months ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Deep learning embedding for nucleotide sequences☆19Updated 5 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Tool for deep mutational scanning experiments.☆54Updated 5 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 6 months ago
- HLA-I ligand predictor☆42Updated 8 months ago
- The tRNA adaptation index☆18Updated 4 months ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆27Updated 7 months ago
- ☆38Updated last year
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated 3 weeks ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆35Updated 4 months ago
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆60Updated 4 years ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆25Updated 6 years ago
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month
- software for the analysis and visualization of deep mutational scanning data☆34Updated 2 years ago
- Examples for gget (https://github.com/pachterlab/gget).☆38Updated 3 months ago
- Absolute quantification package based on quantms.io☆15Updated 3 months ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Updated last month
- DRUGZ software☆23Updated 4 years ago
- ☆65Updated 6 months ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- Immunoglobulin and T-Cell receptor rearrangement software☆49Updated last year
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆89Updated last year
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year