nf-core / epitopepredictionLinks
A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
☆47Updated last week
Alternatives and similar repositories for epitopeprediction
Users that are interested in epitopeprediction are comparing it to the libraries listed below
Sorting:
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆42Updated 3 weeks ago
- Comprehensive Python client for the Uniprot REST API☆50Updated 3 months ago
- PRedictor of IMmunogenic Epitopes☆24Updated last week
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆27Updated 9 months ago
- ☆38Updated last year
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- The tRNA adaptation index☆18Updated 5 months ago
- HLA-II ligand predictor.☆44Updated 2 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated this week
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 8 months ago
- Tool for deep mutational scanning experiments.☆54Updated 6 months ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆16Updated 5 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- HLA-I ligand predictor☆43Updated last week
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- Examples for gget (https://github.com/pachterlab/gget).☆38Updated 3 weeks ago
- ☆22Updated 2 weeks ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Updated 2 weeks ago
- DRUGZ software☆23Updated 4 years ago
- ☆67Updated 7 months ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆75Updated 2 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆20Updated 2 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆59Updated this week
- DIABLO - an integrative multi-group, multi-dataset classification method☆26Updated 6 years ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Absolute quantification package based on quantms.io☆16Updated last week
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆17Updated 2 years ago
- Deep learning embedding for nucleotide sequences☆19Updated 6 months ago