Alternatives and similar repositories for openslide-python

Users that are interested in openslide-python are comparing it to the libraries listed below

• DigitalSlideArchive / HistomicsTK
  A Python toolkit for pathology image analysis algorithms.
  ☆432Updated this week
• choosehappy / HistoQC
  HistoQC is an open-source quality control tool for digital pathology slides
  ☆297Updated 7 months ago
• computationalpathologygroup / ASAP
  Program for the analysis and visualization of whole-slide images in digital pathology
  ☆646Updated last year
• openslide / openslide
  C library for reading virtual slide images
  ☆440Updated last week
• CODAIT / deep-histopath
  A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge
  ☆209Updated 6 years ago
• ysbecca / py-wsi
  Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…
  ☆160Updated 11 months ago
• deroneriksson / python-wsi-preprocessing
  Python Whole Slide Image Preprocessing
  ☆291Updated 2 years ago
• histolab / histolab
  Library for Digital Pathology Image Processing
  ☆414Updated this week
• TissueImageAnalytics / tiatoolbox
  Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
  ☆448Updated this week
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆124Updated last week
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆75Updated last month
• MSKCC-Computational-Pathology / MIL-nature-medicine-2019
  ☆342Updated 3 years ago
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆133Updated last year
• Peter554 / StainTools
  Tools for tissue image stain normalisation and augmentation in Python 3
  ☆338Updated 4 years ago
• 3dimaging / DeepLearningCamelyon
  DeepLearning - Camelyon16 dataset
  ☆122Updated 6 years ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆73Updated this week
• DeepMicroscopy / SlideRunner
  SlideRunner is a tool for massive cell annotations in whole slide images
  ☆79Updated last year
• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆147Updated 6 months ago
• BMIRDS / deepslide
  Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma sli…
  ☆507Updated last year
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆166Updated 3 weeks ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆104Updated 7 months ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆68Updated 2 years ago
• mahmoodlab / TOAD
  AI-based pathology predicts origins for cancers of unknown primary - Nature
  ☆174Updated 3 years ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• vqdang / hover_net
  Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
  ☆615Updated last year
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆31Updated 7 months ago
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆72Updated 6 months ago
• navidstuv / NuClick
  Interactive Segmentation of Nucleus
  ☆63Updated 2 years ago
• ozanciga / self-supervised-histopathology
  Pretrained model for self supervised histopathology
  ☆120Updated 3 years ago
• BiomedSciAI / histocartography
  A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…
  ☆256Updated last year