An implementation of Unet for pytorch designed for digital pathology segmentation
☆128Aug 23, 2022Updated 4 years ago
Alternatives and similar repositories for PytorchDigitalPathology
Users that are interested in PytorchDigitalPathology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An open-source digital pathology based rapid image annotation tool☆93Updated this week
- HistoQC is an open-source quality control tool for digital pathology slides☆331Sep 16, 2026Updated last month
- A Python toolkit for pathology image analysis algorithms.☆491Oct 22, 2026Updated last week
- ⚡ Open-source software for deep learning-based digital pathology☆146Jun 14, 2024Updated 2 years ago
- Code for the blogpost showing how to use Paquo to interact with, and classify, objects in QuPath with machine learning☆10Sep 6, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Coincides with blogpost for using geojson and shapely☆32Nov 16, 2020Updated 5 years ago
- A High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology☆42Dec 8, 2022Updated 3 years ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆82Jul 29, 2025Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆140Oct 23, 2026Updated last week
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆166Jul 25, 2024Updated 2 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Oct 3, 2023Updated 3 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆46Jul 17, 2026Updated 3 months ago
- ☆78Dec 16, 2024Updated last year
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆80Jun 21, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge☆214Mar 7, 2019Updated 7 years ago
- 🔬 Code-free deep segmentation for computational pathology☆58Jun 14, 2024Updated 2 years ago
- Library for Digital Pathology Image Processing☆467Updated this week
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆18Jun 15, 2023Updated 3 years ago
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆329Aug 22, 2022Updated 4 years ago
- Program for the analysis and visualization of whole-slide images in digital pathology☆688Sep 12, 2023Updated 3 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆275Dec 23, 2023Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆76Feb 20, 2026Updated 8 months ago
- Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma sli…☆521Jun 7, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆76Sep 23, 2024Updated 2 years ago
- Pathologist-level interpretable whole-slide cancer diagnosis with deep learning☆132Jun 25, 2019Updated 7 years ago
- Scripts for https://www.nature.com/articles/s41598-018-27707-4, using Convolutional Neural Network to detect lung cancer tumor area☆51Apr 8, 2021Updated 5 years ago
- A Girder plugin for pathology image annotations and analysis.☆80Oct 20, 2026Updated last week
- QuPath - Open-source bioimage analysis for research☆1,469Updated this week
- Open source whole slide image preparation and viewing pipeline☆14Mar 16, 2020Updated 6 years ago
- Python scripts for automatic Whole-Slide Image preprocessing.☆36May 18, 2021Updated 5 years ago
- A Fast Whole-slide image Annotation Tool (FWAT) for conducting painless studies requiring annotations on whole-slide images.☆11Jun 22, 2018Updated 8 years ago
- Delete the label from a whole-slide image☆66Mar 18, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆561Oct 23, 2026Updated last week
- Tools for computational pathology☆467Aug 14, 2026Updated 2 months ago
- Python Whole Slide Image Preprocessing☆301Nov 15, 2022Updated 3 years ago
- Gland segmentation task with GlaS 2015 dataset using UNet model.☆28Mar 24, 2022Updated 4 years ago
- Open source tools for computational pathology - Nature BME☆1,763Apr 14, 2025Updated last year
- Digital Pathology Whole Slide Image Analysis Toolbox☆55Apr 2, 2023Updated 3 years ago
- ☆15Oct 7, 2019Updated 7 years ago