mahmoodlab / TOADLinks
AI-based pathology predicts origins for cancers of unknown primary - Nature
☆174Updated 3 years ago
Alternatives and similar repositories for TOAD
Users that are interested in TOAD are comparing it to the libraries listed below
Sorting:
- A pipeline to segment tissue from the background in histological images☆69Updated 2 years ago
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆215Updated 2 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆296Updated 6 months ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆148Updated last year
- Tools to build deep learning pipelines.☆103Updated 7 months ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆104Updated 5 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆139Updated 3 years ago
- Virtual Alignment of pathoLogy Image Series☆162Updated 6 months ago
- Histopathology Image Analysis☆92Updated last year
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆102Updated 7 months ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆254Updated last year
- Stain normalization tools for histological analysis and computational pathology☆145Updated 5 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- ⚡ Open-source software for deep learning-based digital pathology☆134Updated last year
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆67Updated 4 months ago
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆160Updated 11 months ago
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆310Updated 2 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆107Updated 2 years ago
- First commit☆62Updated 2 years ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆55Updated last year
- Deep Learning-based Frozen Section to FFPE Translation☆56Updated 8 months ago
- Full package for applying deep learning to virtual slides.☆68Updated 6 years ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆53Updated 6 months ago
- Python Whole Slide Image Preprocessing☆290Updated 2 years ago
- List of pathology feature extractors and foundation models☆131Updated 2 weeks ago
- A pan-cancer platform for mutation prediction from routine histology☆68Updated 4 years ago
- ☆55Updated 3 years ago
- Pretrained model for self supervised histopathology☆116Updated 2 years ago
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆200Updated last week