mahmoodlab / TOADLinks
AI-based pathology predicts origins for cancers of unknown primary - Nature
☆174Updated 3 years ago
Alternatives and similar repositories for TOAD
Users that are interested in TOAD are comparing it to the libraries listed below
Sorting:
- A pipeline to segment tissue from the background in histological images☆70Updated 2 years ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆103Updated 6 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆228Updated 2 years ago
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆320Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆106Updated 10 months ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆140Updated 4 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆71Updated 8 months ago
- Stain normalization tools for histological analysis and computational pathology☆152Updated 8 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆69Updated 2 years ago
- Tools to build deep learning pipelines.☆109Updated 10 months ago
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆213Updated last month
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆262Updated last year
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆73Updated 8 months ago
- First commit☆63Updated 3 years ago
- Pretrained model for self supervised histopathology☆120Updated 3 years ago
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆163Updated last year
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- Python Whole Slide Image Preprocessing☆292Updated 2 years ago
- A Python library for deep learning on whole-slide images☆54Updated 3 years ago
- Train a model to predict gene expression from histology slides.☆107Updated 3 years ago
- Deep Learning-based Frozen Section to FFPE Translation☆64Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆81Updated last year
- Full package for applying deep learning to virtual slides.☆69Updated 7 years ago
- Virtual Alignment of pathoLogy Image Series☆178Updated 3 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆138Updated last year
- Software used by the AGH team during the ANHIR challenge.☆28Updated 4 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆155Updated last year
- Re-stained whole slide image alignment☆35Updated last year