mahmoodlab / CLAM
Open source tools for computational pathology - Nature BME
☆1,206Updated 2 months ago
Alternatives and similar repositories for CLAM:
Users that are interested in CLAM are comparing it to the libraries listed below
- DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image☆391Updated 9 months ago
- TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification☆381Updated 9 months ago
- Towards a general-purpose foundation model for computational pathology - Nature Medicine☆388Updated last month
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆552Updated last year
- Ressources of histopathology datasets☆324Updated this week
- A vision-language foundation model for computational pathology - Nature Medicine☆310Updated last month
- Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data☆473Updated 4 months ago
- ☆289Updated 9 months ago
- Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)☆535Updated 10 months ago
- Python Whole Slide Image Preprocessing☆275Updated 2 years ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆399Updated this week
- ☆342Updated 3 years ago
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆292Updated 2 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆280Updated 2 months ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆248Updated last year
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆267Updated last month
- Library for Digital Pathology Image Processing☆391Updated this week
- A Python toolkit for pathology image analysis algorithms.☆407Updated this week
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆189Updated this week
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆171Updated 3 years ago
- Powerful, open-source AI tools for digital pathology.☆288Updated last week
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆197Updated 2 years ago
- Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma sli…☆500Updated 8 months ago
- Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PL…☆305Updated last year
- A graph-transformer for whole slide image classification☆158Updated 7 months ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆129Updated 3 years ago
- Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)☆137Updated 2 years ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆136Updated 9 months ago
- Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021☆184Updated 2 years ago
- A collection of papers about Transformer in the field of medical image analysis.☆467Updated last year