Open source tools for computational pathology - Nature BME
☆1,678Apr 14, 2025Updated last year
Alternatives and similar repositories for CLAM
Users that are interested in CLAM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification☆482May 3, 2024Updated 2 years ago
- DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image☆464Apr 29, 2024Updated 2 years ago
- Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)☆619Mar 19, 2024Updated 2 years ago
- Pathology Foundation Model - Nature Medicine☆725Mar 26, 2025Updated last year
- Toolkit for large-scale whole-slide image processing.☆553May 5, 2026Updated 2 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆244Feb 7, 2023Updated 3 years ago
- Vision-Language Pathology Foundation Model - Nature Medicine☆498Mar 26, 2025Updated last year
- ☆360Mar 29, 2025Updated last year
- Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021☆247Mar 11, 2022Updated 4 years ago
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆330Aug 22, 2022Updated 3 years ago
- ☆174Nov 11, 2023Updated 2 years ago
- Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data☆607May 16, 2025Updated last year
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆168May 14, 2024Updated 2 years ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆713Oct 27, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆348Nov 21, 2021Updated 4 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆269Dec 23, 2023Updated 2 years ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆527Updated this week
- Implementation of Attention-based Deep Multiple Instance Learning in PyTorch☆1,004Jan 8, 2024Updated 2 years ago
- Multimodal Whole Slide Foundation Model for Pathology - Nature Medicine☆343Dec 13, 2025Updated 5 months ago
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆166Nov 19, 2024Updated last year
- Library for Digital Pathology Image Processing☆457May 11, 2026Updated last week
- HistoQC is an open-source quality control tool for digital pathology slides☆325Apr 13, 2026Updated last month
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆147Feb 22, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)☆143Jun 9, 2022Updated 3 years ago
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆183Nov 1, 2021Updated 4 years ago
- A graph-transformer for whole slide image classification☆181Jun 17, 2024Updated last year
- [CVPR 2024] Feature Re-Embedding: Towards Foundation Model-Level Performance in Computational Pathology☆135Sep 19, 2025Updated 8 months ago
- Python Whole Slide Image Preprocessing☆301Nov 15, 2022Updated 3 years ago
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆59Oct 12, 2021Updated 4 years ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆113Oct 15, 2024Updated last year
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆120Jun 19, 2023Updated 2 years ago
- Tools for computational pathology☆452Apr 14, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Program for the analysis and visualization of whole-slide images in digital pathology☆673Sep 12, 2023Updated 2 years ago
- Ressources of histopathology datasets☆545Mar 6, 2026Updated 2 months ago
- This is the official repository for our CVPR 2023 paper 'Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supe…☆91Apr 16, 2024Updated 2 years ago
- Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PL…☆376Sep 20, 2023Updated 2 years ago
- A Python toolkit for pathology image analysis algorithms.☆470Apr 6, 2026Updated last month
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆142Aug 5, 2021Updated 4 years ago
- Histopathology Image Analysis☆94Jul 6, 2023Updated 2 years ago