Alternatives and similar repositories for MKLMM:

Users that are interested in MKLMM are comparing it to the libraries listed below

• andreasottoriva / neutral-tumor-evolution
  Stochastic simulation of next-generation sequencing data from neutrally evolving tumors
  ☆10Updated 8 years ago
• samabs / conliga
  Probabilistic inference of somatic copy number alterations using repeat DNA (FAST-SeqS)
  ☆9Updated 6 years ago
• hendrixlab / mRNN
  mRNN is an implementation of a Gated Recurrent Unit (GRU) network for classification of transcripts as either coding or noncoding.
  ☆20Updated 6 years ago
• dcjones / polee
  Analyzing RNA-Seq with approximate likelihood
  ☆26Updated 4 years ago
• xzhoulab / DRComparison
  Comparison of dimensionality reduction methods
  ☆30Updated 5 years ago
• PMBio / limix
  We have moved to https://github.com/limix/limix.
  ☆24Updated 7 years ago
• mehmetgonen / bmtmkl
  Bayesian Multitask Multiple Kernel Learning
  ☆18Updated 7 years ago
• altayg / Deep-Learning-MHCI
  For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow
  ☆12Updated 6 years ago
• rezacsedu / Convolutional-embedded-networks
  Convolutional Embedded Networks for Population Scale Clustering and Bio-ancestry Inferencing
  ☆11Updated 5 years ago
• cssblab / iOmicsPASS
  Data Integration tool utilizing network information for predictive analyses
  ☆16Updated last year
• TammoR / LogicalFactorisationMachines
  ☆21Updated 6 years ago
• SchulzLab / EpigenomicsTutorial-ISMB2017
  Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague
  ☆14Updated 4 years ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆60Updated 4 years ago
• jpritt / boiler
  Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments
  ☆13Updated 8 years ago
• audreyqyfu / LATE
  Imputation of single cell RNA-sequencing data with autoencoder
  ☆16Updated 3 years ago
• alberlab / igm
  Integrated Genome Modeling
  ☆12Updated last year
• aristoteleo / dynast-release
  Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments
  ☆17Updated last year
• bioturing / hera-t
  Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol
  ☆17Updated 3 years ago
• edawson / svaha
  Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]
  ☆12Updated last year
• pachterlab / PCCA
  Code for performing PCA followed by CCA
  ☆18Updated 6 years ago
• yezhengSTAT / FreeHiC
  FreeHi-C pipeline for high fidelity Hi-C data simulation.
  ☆9Updated 3 years ago
• mpinese / nimpress
  Polygenic score calculation from VCF in Nim.
  ☆15Updated 4 years ago
• csoneson / NativeRNAseqComplexTranscriptome
  Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"
  ☆19Updated 5 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆23Updated 2 years ago
• chr1swallace / simGWAS
  Simulating the expected output from a GWAS with a given causal model.
  ☆11Updated 3 years ago
• architverma1 / tGPLVM
  tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data
  ☆17Updated 5 years ago
• shahcompbio / MultiModalMuSig.jl
  A Julia package for extracting mutation signatures using topic models
  ☆18Updated 3 years ago
• lingfeiwang / findr
  Fast Inference of Networks from Directed Regulations
  ☆22Updated last year
• ren-lab / snp-selex
  ☆17Updated 4 years ago
• daquang / YAMDA
  Yet Another Motif Discovery Algorithm
  ☆53Updated 6 years ago