Can deep learning improve genomic prediction of complex human traits? by Pau Bellot, Gustavo de los Campos, Miguel Pérez-Enciso, Genetics
☆23Aug 2, 2024Updated last year
Alternatives and similar repositories for DL-Biobank
Users that are interested in DL-Biobank are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Dec 20, 2021Updated 4 years ago
- Influence of algorithms, parameter choice, and feature selection on genomic prediction accuracy☆13Apr 2, 2018Updated 8 years ago
- Hybrid method based on a variable-order de bruijn Graph for the error Correction of Long Reads☆11Jan 20, 2021Updated 5 years ago
- Practical Deep Learning for Genomic Prediction: A Keras based guide to implement deep learning☆73Jul 6, 2023Updated 2 years ago
- A procedure to find Fst outliers based on an inferred distribution of neutral Fst☆20Aug 26, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Scripts to convert between file formats for various analyses☆16May 10, 2025Updated last year
- Python language bindings for bwa☆12Mar 27, 2026Updated 2 months ago
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.☆11May 9, 2020Updated 6 years ago
- A repo with just adapter sequences☆15Jul 7, 2025Updated 11 months ago
- an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.☆10Apr 9, 2019Updated 7 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆15Jun 24, 2025Updated 11 months ago
- Docker container for Tripal☆10Mar 29, 2022Updated 4 years ago
- The Genome Analysis Tutorial Page.☆13Oct 5, 2019Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- easyPheno: a model agnostic phenotype prediction framework☆14Nov 24, 2025Updated 6 months ago
- A tool for phasing and imputing haplotypes in 10k+ low coverage sequencing samples☆10Nov 20, 2020Updated 5 years ago
- ☆16Feb 12, 2023Updated 3 years ago
- ☆13Oct 13, 2023Updated 2 years ago
- GATK4 Best Practice Nextflow Pipeline☆35Jan 18, 2018Updated 8 years ago
- QTG_Finder, a QTL causal gene prioritization tool☆11Nov 9, 2024Updated last year
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Mar 5, 2012Updated 14 years ago
- Galaxy Docker Image with Tools for Genome Annotation☆12Apr 20, 2021Updated 5 years ago
- ☆19Sep 20, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code to do data processing and create figures for "The geography of recent genetic ancestry across Europe", http://arxiv.org/abs/1207.381…☆15May 26, 2014Updated 12 years ago
- ☆12Jul 3, 2017Updated 8 years ago
- R package for Reduced Rank Regression☆13Dec 4, 2022Updated 3 years ago
- This repo contains the example code used in my Medium article about NeuralProphet.☆15Dec 16, 2020Updated 5 years ago
- G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…☆17Sep 27, 2017Updated 8 years ago
- SpadeR provides simple R functions to compute various biodiversity indices and related (dis)similarity measures based on individual-based…☆34Mar 11, 2018Updated 8 years ago
- A tool to detect postzygotic single-nucleotide mosaicism from unpaired, trio, or paired samples.☆13Feb 23, 2021Updated 5 years ago
- CHM13 human reference genome issue tracking☆20Jan 18, 2024Updated 2 years ago
- Collection of galaxy tools developed by the artbio-platform at the IBPS (Institut de Biologie Paris-Seine)☆13May 12, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Gene prediction in metagenomic sequences using Glimmer augmented by phylogenetic classification and clustering☆18Nov 3, 2015Updated 10 years ago
- Interactive eQTL visualizations☆14Dec 12, 2022Updated 3 years ago
- Biostatistics with Python, published by Packt☆28May 11, 2026Updated 3 weeks ago
- TreeBeST: Tree Building guided by Species Tree☆14Feb 17, 2011Updated 15 years ago
- genetic correlation between phenotypes in the UK biobank☆14Feb 22, 2024Updated 2 years ago
- source code of the paper "RepLong - de novo repeat discovery from long reads"☆17Jan 4, 2025Updated last year
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 6 years ago