Alternatives and similar repositories for oboformat-tools

Users that are interested in oboformat-tools are comparing it to the libraries listed below

• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆19Updated 11 months ago
• VariantEffect / mavetools
  Useful functions for manipulating Multiplex Assay of Variant Effect datasets.
  ☆10Updated 4 months ago
• RahmanTeam / OpEx
  The OpEx (Optimised Exome) pipeline
  ☆9Updated 6 years ago
• jiujiezz / tsnad
  Detecting somatic mutations and predicting tumor-specific neo-antigens
  ☆28Updated 3 years ago
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆16Updated last year
• pwwang / biopipen
  A set of processes/pipelines for bioinformatics
  ☆13Updated 2 months ago
• idekerlab / ddot
  Toolkit for constructing, analyzing, and visualizing data-driven ontologies
  ☆17Updated 2 years ago
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated 2 months ago
• Bioconductor / KEGGREST
  Client-side REST access to KEGG
  ☆11Updated last month
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• nasqar / ClusterProfShinyORA
  A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries
  ☆13Updated 5 years ago
• thekaplanlab / msabrowser
  🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
  ☆32Updated last year
• staciawyman / blender
  This BLENDER has been sunsetted
  ☆16Updated 8 months ago
• Xinglab / IRIS
  IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
  ☆24Updated 9 months ago
• appris / appris
  Annotating principal splice isoforms
  ☆14Updated 7 months ago
• Guannan-Wang / GOMCL
  GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions
  ☆21Updated last year
• GMOD / jbrowse-jupyter
  A python package for showing JBrowse views
  ☆25Updated last year
• matsengrp / phippery
  ☆18Updated 6 months ago
• chess-genome / chess
  Comprehensive Human Expressed SequenceS
  ☆17Updated 10 months ago
• saezlab / flop
  FunctionaL Omics Processing platform
  ☆13Updated 10 months ago
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆18Updated 2 months ago
• Roy-lab / grinch
  GRiNCH: Graph-Regularized NMF and Clustering for Hi-C
  ☆9Updated last year
• marcottelab / protein_complex_maps
  Kdrew's scripts for handling protein complex map data
  ☆14Updated last year
• zd105 / AllEnricher
  A comprehensive gene set function enrichment tool for multiple species.
  ☆13Updated 5 years ago
• clindet / rctl
  A set of command line tools based on R and JavaScript.
  ☆18Updated 5 years ago
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 4 years ago
• arosenfeld / immunedb
  ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data
  ☆21Updated last year
• HAShihab / fathmm
  The Functional Analysis through Hidden Markov Models Software and Server
  ☆14Updated 10 years ago
• jhhung / EARRINGS
  EARRINGS: An efficient and ingenious adapter removal design for large-scale NGS meta-analyses
  ☆9Updated 3 weeks ago