jolespin / soothsayer
High-level analysis package for (bio-)informatics
☆9Updated 11 months ago
Alternatives and similar repositories for soothsayer:
Users that are interested in soothsayer are comparing it to the libraries listed below
- ☆24Updated last year
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆20Updated 5 months ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆30Updated last year
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 2 years ago
- Find common blocks and differences between DNA sequences☆40Updated 2 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆20Updated last year
- A Python package for gene network analysis☆32Updated 2 years ago
- Align sequences and then parse features.☆17Updated 5 months ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated last year
- Python bindings for the TaxonKit library☆34Updated 3 weeks ago
- A comprehensive gene set function enrichment tool for multiple species.☆13Updated 4 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated last year
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆31Updated 8 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆26Updated this week
- Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.☆20Updated 8 months ago
- ☆9Updated 8 months ago
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆18Updated 7 months ago
- State-of-the-art ab initio prediction of 1D protein structure annotations☆14Updated 3 years ago
- PanGenomePipeline☆15Updated 9 months ago
- ☆14Updated 8 years ago
- Pipeline to apply encoded Kmer analysis to protein sequences☆16Updated 2 weeks ago
- Shiny app to easily create publishable plots for scientific papers☆26Updated 2 months ago
- phylogenetic analyses informed by deep mutational scanning data☆14Updated 7 months ago
- A collaborative notebook for genes and genomes☆11Updated last week
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆19Updated 10 months ago
- ☆10Updated 3 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆17Updated 2 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆12Updated 10 months ago
- Bacterial Annotation by Learned Representation of Genes☆54Updated 4 years ago
- Nail is an Alignment Inference tooL☆44Updated this week