High-level analysis package for (bio-)informatics
☆11Feb 27, 2024Updated 2 years ago
Alternatives and similar repositories for soothsayer
Users that are interested in soothsayer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package for association, differential, clustered, and sample-specific ensemble networks. Direct support for compositional data an…☆12Jun 17, 2026Updated 4 months ago
- A "dot"-plot style viewer for .1aln files☆11Mar 17, 2026Updated 7 months ago
- ARCHIVED: see viral-ngs repo☆10Jan 12, 2026Updated 9 months ago
- ☆10Jul 15, 2024Updated 2 years ago
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆21Jun 4, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆16Jan 16, 2024Updated 2 years ago
- Fast, memory-efficient, and scalable taxonomic and pathway profiling for (pan)genome-resolved metagenomics and metatranscriptomics☆30Oct 26, 2026Updated last week
- Pipeline to apply encoded Kmer analysis to protein sequences☆17Jun 22, 2026Updated 4 months ago
- [DEPRECATED] An R package to pre-process bulk EKG data and detect the physiological peaks☆12Aug 22, 2016Updated 10 years ago
- Fast Tandem Repeat Finder☆20Aug 9, 2026Updated 2 months ago
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆12May 8, 2024Updated 2 years ago
- Random snippets based on tensorflow☆10Jan 22, 2016Updated 10 years ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Mar 4, 2019Updated 7 years ago
- Python package for compositional data analysis including CLR/ILR, proportionality, partial correlation with basis shrinkage, and visualiz…☆30May 11, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repository for the ISMB/ECCB workshop "A practical introduction to multi-omics integration and network analysis"☆11Jul 23, 2021Updated 5 years ago
- Spatial Transcriptomics Dashboard☆27Jul 6, 2023Updated 3 years ago
- Tools to process biological sequences and annotations to modern file formats.☆12Jul 31, 2022Updated 4 years ago
- Shell bootloader for data science.☆11Updated this week
- Code for reproducing results in the paper "Topological gene-expression networks recapitulate brain anatomy and function"☆12Mar 11, 2019Updated 7 years ago
- Software for fitting and testing John Harte and colleagues' Maximum Entropy Theory of Ecology.☆10Sep 2, 2015Updated 11 years ago
- R package for WikiPathways API☆20Nov 3, 2025Updated last year
- ☆35Oct 27, 2020Updated 6 years ago
- Schema repository for the Alliance of Genome Resources persistent data store☆16Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Aug 23, 2021Updated 5 years ago
- Computational workflow for virus genome reconstruction☆10Sep 17, 2026Updated last month
- automatically generates your project's coverage badge using the shields.io service, and then updates your README☆12Updated this week
- Compressed, associative, and exact hash table for k-mers☆11Oct 15, 2026Updated 3 weeks ago
- ClusterScan, search for clusters of features in a given annotation.☆10Aug 26, 2021Updated 5 years ago
- Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database Worm…☆11Apr 16, 2026Updated 6 months ago
- A user-friendly pipeline for viral diversity analysis and characterization.☆16Oct 28, 2026Updated last week
- Keep track of your results☆18Aug 3, 2020Updated 6 years ago
- ☆19Nov 2, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆45Sep 17, 2021Updated 5 years ago
- Gaussian Process and Uncertainty Quantification Summer School 2018☆31Dec 15, 2022Updated 3 years ago
- modENCODE Galaxy on Amazon Cloud☆12Nov 13, 2014Updated 11 years ago
- Open Source Differential Equation Book (Creative Commons License)☆14Aug 27, 2018Updated 8 years ago
- Identification of viral RdRPs in single-cell RNA sequencing data☆15Mar 12, 2026Updated 7 months ago
- Efficient querying of biological databases☆45Oct 27, 2025Updated last year
- Convert QIIME files into Oligotyping subsets.☆15Dec 10, 2014Updated 11 years ago