PathwayMerger / PathMe
Harmonizing pathway databases using Biological Expression Language (BEL)
☆19Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for PathMe
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 3 years ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 3 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- ☆19Updated 2 years ago
- Target prioritization using network representation learning☆11Updated 2 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆34Updated 2 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 2 years ago
- A Python package for gene network analysis☆32Updated 2 years ago
- A metadata commons to store research software metadata☆40Updated this week
- A project for exploring differentially active signaling paths related to proteomics datasets☆38Updated 3 weeks ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆23Updated 3 months ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆31Updated 7 years ago
- This is the public repository for the EPIC tool.☆17Updated 2 years ago
- A 3-Dimensional View of Human Metabolism and Disease☆25Updated 6 years ago
- ☆12Updated 3 years ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆16Updated 4 years ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆21Updated this week
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- Pathway visualization and analysis tool for Pathway Commons and other BioPAX data☆13Updated 2 years ago
- Connect the dots in networks.☆17Updated 4 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 4 years ago
- Visualization and analysis platform for metabolic data and network pattern recognition☆38Updated last week
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated this week
- Summary statistics for repertoires☆16Updated last year
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆17Updated last year
- PyBioPAX: A python implementation of the BioPAX object model☆24Updated 6 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆25Updated last year
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Updated 6 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆48Updated 5 years ago
- Network-based project to explore gene connectivity through biological scales☆22Updated last month