Alternatives and similar repositories for mavetools

Users that are interested in mavetools are comparing it to the libraries listed below

• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• IEDB / PEPMatch
  ☆23Updated last month
• andrewGhazi / malacoda
  Bayesian analysis of MPRA and other high-throughput genomic assays
  ☆10Updated 5 years ago
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated 11 months ago
• vicruiser / 3Dmapper
  Map genetic variants and protein positions to protein interfaces in 3D
  ☆13Updated 2 years ago
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆42Updated 2 weeks ago
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆19Updated 2 years ago
• athchen / beer
  Bayesian enrichment estimation in R
  ☆11Updated last month
• krishnanlab / PyGenePlexus
  A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…
  ☆20Updated 3 weeks ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆54Updated 3 months ago
• broadinstitute / adapt
  A package for designing activity-informed nucleic acid diagnostics for viruses.
  ☆35Updated 2 years ago
• broadinstitute / g2papi
  Python Client Library for the G2P Portal API
  ☆15Updated 4 months ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 3 years ago
• seshadrilab / tcrconvert
  Convert TCR gene names
  ☆15Updated last week
• Protein-Sequence-Annotation / PSALM
  Protein Sequence Annotation with Language Models
  ☆25Updated this week
• ArcInstitute / ScreenPro2
  Flexible analysis of high-content CRISPR screening
  ☆30Updated 4 months ago
• IxI-97 / BiomiX
  R tool to analyse and integrate multiple -omics data
  ☆15Updated this week
• PavlopoulosLab / NORMA
  Network annotation visualization
  ☆18Updated 7 months ago
• pirl-unc / mhcgnomes
  Parsing MHC nomenclature in the wild
  ☆18Updated 9 months ago
• Edinburgh-Genome-Foundry / Sequeduct
  Sequencing analysis pipeline
  ☆14Updated 3 weeks ago
• debbiemarkslab / popEVE
  ☆45Updated 4 months ago
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated 2 months ago
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆25Updated 3 months ago
• weng-lab / logojs-package
  Javascript package for embedding sequence logos
  ☆17Updated 6 months ago
• matsengrp / phippery
  ☆18Updated last year
• goodarzilab / SwitchFinder
  ☆18Updated last year
• goodarzilab / pypage
  python implementation of the PAGE algorithm
  ☆18Updated last year
• TRON-Bioinformatics / neofox
  Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
  ☆33Updated 9 months ago
• earlham-sherlock / earlham-sherlock.github.io
  an open source data platform, developed in the Korcsmaros Group to store, analyze and integrate bioinformatics data
  ☆12Updated 4 years ago