Algorithmic and Utility Extensions for the Imaris Program
☆21Aug 28, 2026Updated last month
Alternatives and similar repositories for imaris_extensions
Users that are interested in imaris_extensions are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Aligning images acquired with the IBEX microscopy imaging technique☆20Jun 28, 2026Updated 3 months ago
- ☆16Sep 21, 2026Updated 2 weeks ago
- IEEE ISBI 2020 SimpleITK Tutorial☆13Mar 7, 2024Updated 2 years ago
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 6, 2026Updated 7 months ago
- A Matlab package to perform Pareto Task Inference (ParTI), which infers tasks from high-dimensional datasets.☆15Jan 21, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆24Aug 26, 2026Updated last month
- browsing large volumetric data and shapes☆24Sep 28, 2026Updated last week
- daoSPIM microscope project: software and hardware☆12Jul 6, 2023Updated 3 years ago
- ☆13Apr 21, 2021Updated 5 years ago
- Scripts from the GBM cellular states paper☆21Feb 24, 2021Updated 5 years ago
- ImgLib2 RealTransform brought to QuPath☆35Mar 12, 2026Updated 6 months ago
- ThrustCurve.org third revision☆13Sep 13, 2026Updated 3 weeks ago
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆17Sep 25, 2026Updated last week
- A tool for manual pointwise deformable registration using bigdataviewer.☆37Sep 23, 2026Updated 2 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 5 years ago
- ☆17Sep 13, 2024Updated 2 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Sep 1, 2026Updated last month
- A template to start an ITK Module☆13Oct 2, 2026Updated last week
- A setup script to generate a Python Wheels☆18Jul 30, 2026Updated 2 months ago
- R package for analysing proteomics data☆49Apr 17, 2023Updated 3 years ago
- Histology Topography Cytometry Analysis Toolbox☆69Mar 23, 2026Updated 6 months ago
- A two-hour introduction to data for Python *or* R.☆10Apr 24, 2022Updated 4 years ago
- ImgLib2-based viewer for registered SPIM stacks and more☆45Sep 9, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆24Sep 25, 2025Updated last year
- ☆17Feb 23, 2024Updated 2 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆31Feb 17, 2023Updated 3 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 8 years ago
- ☆54Mar 7, 2023Updated 3 years ago
- A probabilistic cell typing algorithm for spatial transcriptomics.☆26Jun 24, 2026Updated 3 months ago
- Scripts and code relating to building anatomical templates.☆11Aug 14, 2026Updated last month
- Methods for label-free mass spectrometry proteomics☆16May 13, 2026Updated 4 months ago
- ☆30Oct 4, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 5 years ago
- A Python package for tissue and pen marking segmentation on low-magnification (1.25x) whole slide images.☆18Feb 2, 2026Updated 8 months ago
- Code for the spatialLIBD R/Bioconductor package and shiny app☆114Sep 29, 2026Updated last week
- Single-cell Hierarchical Poisson Factorization☆76Feb 14, 2026Updated 7 months ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated 2 years ago
- Blue Brain multi-modal registration and alignment toolbox☆12Feb 14, 2024Updated 2 years ago
- ☆10Jan 21, 2023Updated 3 years ago