GFF toolkit
☆16May 23, 2026Updated last month
Alternatives and similar repositories for gfftk
Users that are interested in gfftk are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A comprehensive telomere annotation tool for genome assemblies and graphs.☆16Jul 8, 2026Updated last week
- Fast Tandem Repeat Finder☆16Jun 17, 2026Updated last month
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- Parsing and evaluating gene annotation and spliced alignment☆29Jul 22, 2025Updated 11 months ago
- ☆22Jan 13, 2026Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Generate alternative long reads with the help of target`s assemblies, target`s PacBio HiFi reads and reference genome.☆20Mar 25, 2026Updated 3 months ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- Multithreaded read analysis☆25May 24, 2026Updated last month
- FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing☆45Dec 21, 2021Updated 4 years ago
- ☆26Jan 26, 2026Updated 5 months ago
- TD2☆41May 17, 2026Updated 2 months ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- base-level dotplots from PAF alignments☆35Sep 18, 2025Updated 10 months ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Mar 18, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated last year
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆60Jul 5, 2026Updated 2 weeks ago
- meta-pipeline for repetitive element de-fragmentation and annotation☆28Oct 1, 2020Updated 5 years ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 4 years ago
- Eukaryotic genome annotation software.☆28Updated this week
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆110Jun 17, 2022Updated 4 years ago
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated 2 years ago
- plot Multiple Sequence Alignment(MSA) of Clustal by python package☆14Mar 14, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Automatically exported from code.google.com/p/prank-msa☆37Mar 19, 2026Updated 4 months ago
- ☆13Sep 11, 2025Updated 10 months ago
- Genomics 3D Visualizer☆14Jun 14, 2024Updated 2 years ago
- blastn2dotplots: multiple dot-plot visualizer☆28Sep 15, 2025Updated 10 months ago
- Dot: An interactive dot plot viewer for comparative genomics☆37Jun 22, 2026Updated 3 weeks ago
- Telomere compliment tools☆26Nov 17, 2025Updated 8 months ago
- Automatic Assembly For The Fungi☆27Jun 16, 2026Updated last month
- Improved long-read assembly by preserving contained reads☆30Aug 22, 2024Updated last year
- MCHelper: An automatic tool to curate transposable element libraries☆50May 6, 2026Updated 2 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A tutorial on how to annotate and interpret novel mammalian reference genomes☆29Jun 13, 2026Updated last month
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Jun 3, 2026Updated last month
- PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.☆29Aug 20, 2025Updated 11 months ago
- Annotation helper tool for the manual curation of transposable element consensus sequences☆55Mar 5, 2025Updated last year
- Whole genome visualization and comparative genomics in R☆24Feb 18, 2025Updated last year
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆214Aug 21, 2024Updated last year
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Apr 28, 2021Updated 5 years ago