nextflow-io / nf-hack17-tutorialLinks
Nextflow basic tutorial for newbie users
☆33Updated 7 years ago
Alternatives and similar repositories for nf-hack17-tutorial
Users that are interested in nf-hack17-tutorial are comparing it to the libraries listed below
Sorting:
- A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools☆23Updated 7 years ago
- See the main fork of this repository here >>>☆38Updated 3 months ago
- Multi-sample somatic variant caller☆52Updated 3 years ago
- An automated RNA-seq pipeline using Nextflow☆37Updated 11 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- A collection of modules and sub-workflows for Nextflow☆27Updated this week
- Deep Variant as a Nextflow pipeline☆30Updated 5 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆49Updated this week
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆53Updated 4 years ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 7 years ago
- Mapped QC analysis program☆44Updated 7 years ago
- A python parser to simplify and build the VCF (Variant Call Format).☆49Updated 10 months ago
- An automated ChIP-seq pipeline using Nextfow☆18Updated 2 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- GATK4 Best Practice Nextflow Pipeline☆32Updated 7 years ago
- Generic human DNA variant annotation pipeline☆58Updated last year
- Making Snakemake workflows into full-fledged command line tools since 1999.☆52Updated 7 years ago
- Genomic data interpretation and visualization Workshop☆21Updated last month
- (DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER☆31Updated 6 years ago
- Gene Fusion Visualiser☆51Updated 2 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆39Updated 4 years ago
- conda recipes for genomic data☆85Updated 4 years ago
- Portable WDL workflows for IDseq production pipelines☆32Updated 3 years ago
- List of IARC bioinformatics pipelines and resources☆51Updated last month
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Splice junction analysis and filtering from BAM files☆40Updated 3 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- An interactive web-tool for RNA-seq analysis☆68Updated 6 months ago
- Remove primer sequence from BAM alignments by soft-clipping☆31Updated 5 years ago