ncbi / elastic-blastLinks
ElasticBLAST is a cloud-based tool to perform your BLAST searches faster and make you more effective
☆59Updated 2 weeks ago
Alternatives and similar repositories for elastic-blast
Users that are interested in elastic-blast are comparing it to the libraries listed below
Sorting:
- ARTIC SARS-CoV-2 workflow and reporting☆51Updated last month
- Catalog of genomic indexes freely available from public clouds☆60Updated last month
- CLI tool to annotate genes with KOfam☆80Updated 2 years ago
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆82Updated 7 years ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆77Updated 2 years ago
- Reference-guided multiple sequence alignment of viral genomes☆68Updated 4 months ago
- Bioinformatics program inStrain☆171Updated 3 weeks ago
- Small variant calling for haploid samples☆38Updated last month
- Portable WDL workflows for CZ ID production pipelines☆43Updated 2 weeks ago
- Supporting code for uncultivated gut virus manuscript☆72Updated last year
- viralVerify: viral contig verification tool☆69Updated 3 years ago
- SEER, reimplemented in python 🐍🔮☆122Updated 2 weeks ago
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆90Updated 2 weeks ago
- A Python package for microbiome sequencing analysis with QIIME 2☆45Updated last year
- Similarity networks of biosynthetic gene clusters☆115Updated this week
- A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), wit…☆92Updated last year
- VAPiD: Viral Annotation and Identification Pipeline☆52Updated last year
- sensitive and precise assembly of short sequencing reads☆155Updated 7 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆110Updated 7 months ago
- ☆129Updated 9 months ago
- Fast and flexible ORF finder☆69Updated 3 years ago
- Python programs for processing GFF3 files☆98Updated last year
- Antibiotic resistance prediction in minutes☆108Updated 6 months ago
- Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.☆88Updated this week
- Detection of incorrectly labeled sequences across kingdoms☆86Updated 2 years ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆57Updated 10 months ago
- 🔗Genome assembly scaffolder using minimizer graphs☆83Updated 8 months ago
- Logan Unitigs and Contigs☆132Updated 3 weeks ago
- Protein Alignment and Detection Interface☆61Updated last year
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆68Updated last month