Alternatives and similar repositories for Jutils:

Users that are interested in Jutils are comparing it to the libraries listed below

• splicebox / MntJULiP
  Comprehensive and scalable differential splicing analyses
  ☆14Updated 7 months ago
• iaaaka / evo-devo
  ☆11Updated 3 years ago
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 4 years ago
• YeoLab / gscripts
  General Use Scripts and Helper functions
  ☆16Updated 6 years ago
• SziKayLeung / Whole_Transcriptome_Paper
  ☆17Updated 9 months ago
• jsh58 / DMRfinder
  Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data
  ☆27Updated last year
• YangLab / CLEAR
  direct comparison of circular and linear RNA expression
  ☆20Updated 4 years ago
• huyustats / SCATS
  A statistical tool to detect differential alternative splicing events using single-cell RNA-seq
  ☆21Updated last year
• mortazavilab / cerberus
  ☆16Updated 6 months ago
• gagneurlab / splicemap
  ☆19Updated 3 months ago
• alexchwong / SpliceWiz
  SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.
  ☆16Updated 3 months ago
• epigen / open_pipelines
  Pipelines for NGS data preprocessing by the Bock lab and friends
  ☆20Updated 2 years ago
• StatBiomed / CamoTSS
  Detection and couting alternative TSS in single cells
  ☆12Updated 9 months ago
• gagneurlab / FRASER-analysis
  Accompanying analysis code for the FRASER manuscript
  ☆26Updated 4 years ago
• NYU-BFX / lncRNA-screen
  lncRNA-screen
  ☆26Updated 7 years ago
• markowetzlab / Drews2022_CIN_Compendium
  Main repository for Drews et al. (Nature, 2022)
  ☆39Updated last year
• oicr-gsi / sequenza
  Workflow for Sequenza, cellularity and ploidy
  ☆19Updated 7 months ago
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• montilab / nf-gwas-pipeline
  A Nextflow Genome-Wide Association Study (GWAS) Pipeline
  ☆32Updated 8 months ago
• pdxgx / neoepiscope
  predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data
  ☆26Updated last year
• Dowell-Lab / DAStk
  Differential ATAC-seq toolkit
  ☆27Updated last year
• ndbrown6 / MSK-GRAIL-TECHVAL
  High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants
  ☆21Updated 4 years ago
• databio / bedshift
  Bedfile perturbation tool
  ☆17Updated last year
• jfjlaros / demultiplex
  Versatile FASTA/FASTQ demultiplexer.
  ☆32Updated 8 months ago
• biosinodx / SCcaller
  Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data
  ☆34Updated 2 months ago
• cfce / chilin
  ChIP-seq DC and QC Pipeline
  ☆34Updated 3 years ago
• asoltis / MutEnricher
  Somatic coding and non-coding mutation enrichment analysis for tumor WGS data
  ☆10Updated 3 years ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated this week
• s-andrews / sradownloader
  A script to make downloading of SRA/GEO data easier
  ☆31Updated last year
• ManchesterBioinference / IntegratingATAC-RNA-HiC
  scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper
  ☆23Updated 2 years ago