Alternatives and similar repositories for glycowork:

Users that are interested in glycowork are comparing it to the libraries listed below

• twoXes / awesome-structural-bioinformatics
  Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…
  ☆69Updated last year
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆84Updated last year
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 2 months ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆95Updated last week
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆33Updated 3 weeks ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated 10 months ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆37Updated last year
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆85Updated 6 months ago
• tadorfer / protlearn
  A Python package for extracting protein sequence features
  ☆58Updated 2 years ago
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆66Updated 6 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆57Updated 3 years ago
• aqlaboratory / rgn2
  ☆104Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated 9 months ago
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆72Updated 4 years ago
• biofold / ddgun
  predict stability change upon mutation
  ☆27Updated 7 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆72Updated 6 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆83Updated 5 months ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆49Updated last month
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆54Updated 2 years ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆119Updated 3 weeks ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆104Updated last month
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆164Updated 6 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆32Updated 2 years ago
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆60Updated last year
• alex-hh / deep-protein-generation
  ☆56Updated 2 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 2 months ago
• tbepler / prose
  Multi-task and masked language model-based protein sequence embedding models.
  ☆99Updated 3 years ago
• idptools / metapredict
  A machine learning based protein disorder predictor.
  ☆21Updated 3 months ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆34Updated 4 years ago
• churchlab / UniRep-analysis
  Analysis and figure code from Alley et al. 2019.
  ☆58Updated last year