Alternatives and similar repositories for glycowork:

Users that are interested in glycowork are comparing it to the libraries listed below

• twoXes / awesome-structural-bioinformatics
  Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…
  ☆70Updated last year
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆88Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated 10 months ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆86Updated 7 months ago
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆33Updated last month
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆57Updated 3 years ago
• raghavagps / Pfeature
  A software package for computing features of peptides and proteins
  ☆57Updated 9 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆86Updated 6 months ago
• Rostlab / goPredSim
  ☆44Updated 3 months ago
• tadorfer / protlearn
  A Python package for extracting protein sequence features
  ☆58Updated 2 years ago
• tbepler / prose
  Multi-task and masked language model-based protein sequence embedding models.
  ☆99Updated 3 years ago
• churchlab / UniRep-analysis
  Analysis and figure code from Alley et al. 2019.
  ☆58Updated last year
• hendrixlab / bpRNA
  bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure
  ☆46Updated last year
• yarongef / DistilProtBert
  DistilProtBert implementation, a distilled version of ProtBert model.
  ☆15Updated 2 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆56Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated 11 months ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆34Updated 4 years ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆95Updated 3 weeks ago
• aqlaboratory / rgn2
  ☆104Updated last year
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆37Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆40Updated 2 years ago
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆166Updated 4 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆96Updated last month
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆44Updated 3 years ago
• zongmingchua / cafa5
  Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)
  ☆12Updated 9 months ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆34Updated 3 years ago
• biofold / ddgun
  predict stability change upon mutation
  ☆27Updated 8 months ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆50Updated last year
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆63Updated 7 years ago
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆169Updated 7 months ago