Alternatives and similar repositories for glycowork

Users that are interested in glycowork are comparing it to the libraries listed below

• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated last year
• twoXes / awesome-structural-bioinformatics
  Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…
  ☆73Updated 2 years ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆103Updated 2 weeks ago
• raghavagps / Pfeature
  A software package for computing features of peptides and proteins
  ☆64Updated last year
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 6 months ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 2 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• greener-group / progres
  Fast protein structure searching or your money back
  ☆112Updated 5 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• Arcadia-Science / ProteinCartography
  a pipeline to build similarity maps of protein space
  ☆37Updated 9 months ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆33Updated 2 weeks ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆56Updated this week
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆69Updated 8 years ago
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆74Updated 4 years ago
• aqlaboratory / rgn2
  ☆108Updated last year
• idptools / parrot
  Python package for protein sequence-based bidirectional recurrent neural network. Generalizable to a variety of protein bioinformatic app…
  ☆20Updated last month
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆36Updated 4 months ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆96Updated 3 weeks ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆106Updated 4 months ago
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆67Updated 2 years ago
• normandavey / AlphaFold2-IDR-complex-prediction
  ☆39Updated 4 years ago
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆80Updated last year
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆60Updated 3 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆177Updated 3 months ago
• Rostlab / goPredSim
  ☆48Updated 9 months ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆53Updated 10 months ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆41Updated 2 years ago