Alternatives and similar repositories for glycowork

Users that are interested in glycowork are comparing it to the libraries listed below

• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated last week
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆108Updated 3 months ago
• twoXes / awesome-structural-bioinformatics
  Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…
  ☆74Updated 2 years ago
• raghavagps / Pfeature
  A software package for computing features of peptides and proteins
  ☆65Updated last year
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆86Updated last year
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 8 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆76Updated 3 months ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 5 months ago
• Rostlab / goPredSim
  ☆49Updated last year
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆34Updated 3 months ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆118Updated 2 months ago
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆180Updated 2 weeks ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆110Updated 2 weeks ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆64Updated 5 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• Arcadia-Science / ProteinCartography
  A pipeline to build similarity maps of protein space
  ☆40Updated last month
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆70Updated 8 years ago
• aqlaboratory / rgn2
  ☆108Updated 2 years ago
• flatironinstitute / deepblast
  Neural Networks for Protein Sequence Alignment
  ☆133Updated last year
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆75Updated 4 years ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 8 months ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆100Updated last month
• jaswindersingh2 / SPOT-RNA
  RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
  ☆107Updated 6 months ago
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆36Updated 6 months ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆57Updated last week
• tadorfer / protlearn
  A Python package for extracting protein sequence features
  ☆62Updated 3 years ago
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆103Updated 4 years ago
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆60Updated 3 years ago
• normandavey / AlphaFold2-IDR-complex-prediction
  ☆39Updated 4 years ago