mobiusklein / glycresoft
An LC-MS/MS glycan and glycopeptide search engine
☆11Updated 3 months ago
Alternatives and similar repositories for glycresoft:
Users that are interested in glycresoft are comparing it to the libraries listed below
- ☆18Updated 2 months ago
- Python package for investigating the structural context of PTMs☆28Updated 3 months ago
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆26Updated last week
- A Python interface to proteomics data repositories☆34Updated last month
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated 2 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated last month
- ☆13Updated 6 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆42Updated last month
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆48Updated this week
- MS/MS prediction for peptides☆22Updated 4 years ago
- ☆58Updated 11 months ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆17Updated this week
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆39Updated last year
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 3 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated last week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆42Updated last week
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- Python client for PRIDE Archive Rest API.☆23Updated last week
- Rescoring and spectral library generation pipeline for proteomics.☆42Updated this week
- ☆11Updated 3 months ago
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Updated last year
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆20Updated last month
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated last week
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆22Updated 6 months ago
- Community-curated tutorials and datasets for ML in proteomics☆52Updated 3 weeks ago
- Python framework for Deep Learning in Proteomics☆25Updated last week
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆63Updated this week
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆35Updated 5 months ago
- EasyPQP: Simple library generation for OpenSWATH☆11Updated 2 months ago