misshie / ngsdat2
NGS Data Analysis Textbook Version 2 (Disease Genome Analysis)
☆41Updated 4 years ago
Alternatives and similar repositories for ngsdat2
Users that are interested in ngsdat2 are comparing it to the libraries listed below
Sorting:
- RNAseq pipeline centered on Salmon☆27Updated 5 months ago
- Step by step tutorial for CAGE analysis☆9Updated 3 years ago
- ☆12Updated 2 years ago
- Web app for automated, systematic, and integrated RNA-seq differential expression analysis☆15Updated last month
- PythonによるシングルセルRNA-seq解析。☆20Updated 2 years ago
- Package for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)☆12Updated last year
- dcHiC: Differential compartment analysis for Hi-C datasets☆69Updated last year
- parallel-fastq-dump implementation in bash script☆41Updated 5 years ago
- Quantification of transposable element expression using RNA-seq☆69Updated last year
- A docker image for single-cell analysis☆88Updated 3 months ago
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆34Updated 3 years ago
- ☆38Updated 8 months ago
- NGS Tutorial☆15Updated 8 years ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆73Updated last week
- Locate transgenic insertion sites☆11Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆59Updated last year
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆80Updated 5 months ago
- Cooler demo using a Jupyter notebook Binder☆17Updated 4 years ago
- Extract 3D contacts (.pairs) from sequencing alignments☆112Updated 3 months ago
- ☆30Updated 6 years ago
- Analysis software for Nanorate Sequencing (NanoSeq) experiments☆17Updated 4 months ago
- ☆58Updated 3 years ago
- ☆38Updated 5 years ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆73Updated 2 years ago
- ☆43Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 2 months ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 3 months ago
- Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture…☆86Updated 2 years ago
- Materials for tutorial at ajacs68 (Japanese)☆33Updated 7 years ago
- Tools for working with BUS files☆98Updated 3 weeks ago