Web app for automated, systematic, and integrated RNA-seq differential expression analysis
☆16May 1, 2026Updated 5 months ago
Alternatives and similar repositories for RNAseqChef
Users that are interested in RNAseqChef are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GTS: Genome Transformation Subprograms☆15Feb 25, 2023Updated 3 years ago
- PythonによるシングルセルRNA-seq解析。☆23Dec 16, 2022Updated 3 years ago
- A Nextflow pipeline for genome and pan-genome annotation☆16Feb 22, 2026Updated 7 months ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆86Oct 1, 2026Updated last week
- ChromBERT: Uncovering Chromatin State Motifs in the Human Genome using a BERT-based Approach☆12Mar 17, 2026Updated 6 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A straightforward and complete next-generation sequencing read simulator☆22Feb 18, 2024Updated 2 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆28Sep 9, 2026Updated last month
- Haplotype-aware assembly of complex regions and small genomes☆15Aug 27, 2026Updated last month
- Fast, self-contained VCF to MAF converter with embedded annotation (Rust rewrite of vcf2maf)☆26Updated this week
- 「生物ネットワーク解析」の補足資料☆26Feb 20, 2025Updated last year
- Single cell ANANSE Gene-regulatory-network analysis from Seurat objects☆11Sep 9, 2026Updated last month
- Grasp: A bridge between GraphQL and SPARQL☆43Mar 7, 2026Updated 7 months ago
- A RubyGem that provides common datasets☆33Sep 26, 2026Updated 2 weeks ago
- ☆14May 7, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆11Aug 2, 2023Updated 3 years ago
- ☆33Updated this week
- Monorepo for Apollo 3 server-side and client-side (JBrowse 2 plugin) components.☆17Updated this week
- Metascape for Bioinformaticians (MSBio)☆14Jun 30, 2021Updated 5 years ago
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 6 years ago
- DBCLS RDFizing database guidelines☆16Aug 31, 2024Updated 2 years ago
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- Docker container for Illumina bcl2fastq☆13Aug 7, 2024Updated 2 years ago
- ☆13Dec 16, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- CWL experimental grammar☆11Nov 16, 2025Updated 10 months ago
- Yet another LLM command line interface☆16Dec 9, 2024Updated last year
- ViBE: a hierarchical BERT model to identify viruses using metagenome sequencing data☆11Sep 6, 2022Updated 4 years ago
- Interactive TooManyCells Trees☆14Jun 23, 2026Updated 3 months ago
- ☆11Apr 22, 2022Updated 4 years ago
- ☆18Apr 26, 2026Updated 5 months ago
- ☆13Sep 4, 2026Updated last month
- NGS Data Analysis Textbook Version 2 (Disease Genome Analysis)☆43May 7, 2021Updated 5 years ago
- ☆13Jan 25, 2026Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- physics-informed neural network based method for solving single-cell population dynamics☆18Sep 19, 2026Updated 3 weeks ago
- RDF and SPARQL ideas to build on top of [odgi](https://github.com/pangenome/odgi)☆13Mar 20, 2024Updated 2 years ago
- GlycoRDF is an RDF standard for glycomics data.☆17Feb 5, 2025Updated last year
- Offline TUI English vocabulary trainer built with Go, Bubble Tea, and SQLite.☆14Apr 20, 2026Updated 5 months ago
- Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-☆34Sep 20, 2019Updated 7 years ago
- ☆14Dec 16, 2022Updated 3 years ago
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago