Alternatives and similar repositories for AMR

Users that are interested in AMR are comparing it to the libraries listed below

• KarstensLab / microshades
  This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions f…
  ☆67Updated last year
• sprouffske / growthcurver
  Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…
  ☆47Updated 3 years ago
• ErikKusch / An-Introduction-to-Biostatistics-Using-R
  Biostatistics - Why? What? How?
  ☆29Updated 4 years ago
• SchlossLab / mikropml
  User-Friendly R Package for Supervised Machine Learning Pipelines
  ☆58Updated 4 months ago
• adw96 / biost509
  Class materials for BIOST 509
  ☆60Updated 5 years ago
• vmikk / metagMisc
  Miscellaneous functions for metagenomic analysis.
  ☆50Updated 3 weeks ago
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• adw96 / breakaway
  Species richness with high diversity
  ☆68Updated 2 months ago
• grunwaldlab / metacoder
  Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
  ☆141Updated 4 months ago
• jbengler / tidyheatmaps
  Heatmaps from Tidy Data
  ☆66Updated 5 months ago
• tpetzoldt / growthrates
  R Package growthrates
  ☆27Updated 2 weeks ago
• riffomonas / code_club
  ☆17Updated this week
• surh / scip_barplot
  Workshop materials for SFSU SCIP 2022.
  ☆13Updated 3 years ago
• mikeblazanin / gcplyr
  gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data
  ☆34Updated 4 months ago
• gmteunisse / ggnested
  ggplots for nested data
  ☆10Updated 11 months ago
• alperezq / FancyPubFigures
  R scripts to generate publication summary figures
  ☆22Updated 4 years ago
• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆60Updated 5 years ago
• pmartinezarbizu / pairwiseAdonis
  Pairwise multilevel comparison using adonis
  ☆76Updated 2 years ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆70Updated 3 weeks ago
• gavinsimpson / ggvegan
  ggplot-based plots for vegan
  ☆116Updated 3 months ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆37Updated 9 years ago
• cmerkes / qPCR_LOD_Calc
  LoD calculator
  ☆20Updated 5 years ago
• rsh249 / bioinformatics
  An Introductory Undergraduate course in Bioinformatics
  ☆47Updated 4 years ago
• yijuanhu / LDM-Archive
  Linear Decomposition Model
  ☆24Updated 2 years ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆94Updated 2 months ago
• mirnavazquez / RbiMs
  R tools for reconstructing metabolisms.
  ☆14Updated 2 weeks ago
• adw96 / DivNet
  diversity estimation under ecological networks
  ☆83Updated 2 months ago
• ChrisHIV / teaching
  ☆19Updated 2 months ago
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago