Alternatives and similar repositories for BioID:

Users that are interested in BioID are comparing it to the libraries listed below

• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆58Updated last month
• danlwarren / RWTY
  R We There Yet?
  ☆30Updated 2 years ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• adw96 / breakaway
  Species richness with high diversity
  ☆68Updated last year
• adw96 / DivNet
  diversity estimation under ecological networks
  ☆83Updated last year
• arendsee / rhmmer
  Simple R utilities for working with HMMER
  ☆18Updated 3 months ago
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• pbuttigieg / masame
  Code to run the shiny functions for the MASAME suite
  ☆28Updated 4 years ago
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆24Updated 2 weeks ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆54Updated 6 months ago
• statdivlab / tinyvamp
  ☆19Updated last year
• jgolob / maliampi
  Maximum Likelihood Amplicon Pipeline
  ☆22Updated 8 months ago
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆21Updated 4 years ago
• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆35Updated 9 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆68Updated 8 months ago
• vallenderlab / MicrobiomeR
  A comprehensive and customizable R package for microbiome analysis.
  ☆21Updated 2 years ago
• ying14 / yingtools2
  Ying's tools for analysis, with particular focus on microbiome data
  ☆41Updated 3 weeks ago
• mikeblazanin / gcplyr
  gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data
  ☆30Updated 2 weeks ago
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆16Updated 6 years ago
• aghozlane / shaman
  SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…
  ☆13Updated 11 months ago
• yijuanhu / LDM-Archive
  Linear Decomposition Model
  ☆24Updated last year
• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆23Updated 6 months ago
• lvulliard / BioCircos.R
  Htmlwidgets binding R commands to the BioCircos.js library
  ☆37Updated 5 years ago
• Phylogenetics-Brown-BIOL1425 / phylogeneticbiology
  syllabus and lectures for the course
  ☆8Updated 8 years ago
• mikemc / speedyseq
  Speedy versions of phyloseq functions
  ☆46Updated 9 months ago
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆44Updated this week
• SchlossLab / schtools
  Schloss Lab Tools for Reproducible Microbiome Research 💩
  ☆30Updated last year
• sprouffske / growthcurver
  Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…
  ☆44Updated 3 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆69Updated last year