ViennaRNA / RNAsketchLinks
Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
☆21Updated 7 years ago
Alternatives and similar repositories for RNAsketch
Users that are interested in RNAsketch are comparing it to the libraries listed below
Sorting:
- Python package and command line tool for epitope prediction☆52Updated last year
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- A platform to do RNA science☆27Updated 4 years ago
- Peptide library design☆23Updated 5 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 10 months ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 2 weeks ago
- A Python platform for Structural Bioinformatics☆58Updated 9 months ago
- a collection of colabs useful for molecular biology☆31Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- MOLeculAR structure annoTator☆33Updated last year
- ☆39Updated 4 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- Comprehensive Python client for the Uniprot REST API☆54Updated 2 months ago
- Code for LazyAF pipeline☆21Updated last year
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆94Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 5 months ago
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 3 years ago
- Python Client Library for the G2P Portal API☆15Updated 4 months ago
- ☆25Updated last year
- A package for making tree-based visualizations for embedding vectors☆10Updated 2 years ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆19Updated 6 years ago
- Evolutionary conservation estimation of residues or nucleotides☆56Updated 3 years ago
- ☆30Updated 7 months ago
- Convert PDB residues to their Uniprot equivalents☆17Updated 5 years ago
- Long disorder consensus predictor☆17Updated 3 months ago
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Updated 4 years ago
- Python library for calculting synergy of drug combinations using several drug synergy frameworks☆36Updated last year
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 3 months ago