Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic
☆21Apr 21, 2026Updated last month
Alternatives and similar repositories for MINE-Database
Users that are interested in MINE-Database are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- JBEI Quantitative Metabolic Modeling library☆13Feb 7, 2020Updated 6 years ago
- A fantastic crate for formatting numbers using the appropriate unicode characters☆15Jan 13, 2026Updated 4 months ago
- Bondorder and formal charge determination for molecules☆10Jan 16, 2022Updated 4 years ago
- Multiple sequence alignment browser☆11Dec 12, 2022Updated 3 years ago
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Sep 24, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Search spectral library with entropy similarity☆21Apr 21, 2025Updated last year
- NP-KG: Knowledge Graph Framework for Natural Product-Drug Interactions☆19Jun 25, 2024Updated last year
- cameo - computer aided metabolic engineering & optimization☆124Nov 7, 2022Updated 3 years ago
- Python utilities for SBML☆41Apr 23, 2026Updated 3 weeks ago
- 👁️🗨️ Scientists often do the same bad stuff. Automate giving deterministic feedback during peer review with determinstic (LLM-free)☆30May 9, 2025Updated last year
- ☆24Mar 26, 2025Updated last year
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆22Aug 30, 2025Updated 8 months ago
- The gview wiki migrated to GitHub.☆11Sep 3, 2020Updated 5 years ago
- ☆27Mar 31, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆36Updated this week
- A Docker-based, cloudable platform for the development of chemoinformatics-centric web applications and microservices.☆47Jun 4, 2025Updated 11 months ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Apr 16, 2026Updated last month
- Reinforcement Learning based bioretrosynthesis tool☆59Apr 2, 2025Updated last year
- ☆40May 13, 2026Updated last week
- RDF Community Discussions. Ask anything here!☆13Apr 11, 2024Updated 2 years ago
- Generating graph structures from OWL ontologies☆12Nov 21, 2017Updated 8 years ago
- GNverifier verifies scientific names against more than 100 biodiversity databases☆37Mar 27, 2026Updated last month
- novoStoic2.0: Integrated Pathway Design Tool with Thermodynamic Considerations and Enzyme Selection☆11Apr 28, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆33Feb 21, 2026Updated 3 months ago
- ☆20Sep 24, 2016Updated 9 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆26Mar 8, 2023Updated 3 years ago
- An automated model test system for synthetic biology models of gene expression and regulation.☆15Sep 17, 2020Updated 5 years ago
- A Nextflow pipeline for NGS variant calling on SARS-CoV-2. From FASTQ files to normalized and annotated VCF files from GATK, BCFtools, Lo…☆20Jul 11, 2024Updated last year
- GenomeThreader gene prediction software.☆14Nov 10, 2025Updated 6 months ago
- An automated post sequencing data processing pipeline for Illumina HiSeq☆14Aug 28, 2025Updated 8 months ago
- Coming Soon...☆10Mar 14, 2022Updated 4 years ago
- Python package to study microbial communities using metabolic modeling.☆128Mar 31, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models