Alternatives and similar repositories for MINE-Database:

Users that are interested in MINE-Database are comparing it to the libraries listed below

• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• mmzdouc / FERMO
  Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.
  ☆33Updated 5 months ago
• brsynth / rp2paths
  RetroPath2.0 to pathways
  ☆16Updated last year
• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆19Updated last year
• snijderlab / align-cli
  A CLI for pairwise alignment of sequences, using both normal and mass based alignment.
  ☆12Updated last month
• oolonek / ISDB
  A database of In-Silico predicted MS/MS spectrum of Natural Products
  ☆14Updated 2 years ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆40Updated 3 months ago
• mandelbrot-project / memo
  Ms2 basEd saMple vectOrization (memo) package
  ☆17Updated last year
• latendre / PythonCyc
  ☆22Updated 4 years ago
• EBI-Metabolights / MetaboLights
  MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and cover…
  ☆21Updated last week
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆27Updated 2 years ago
• BTheDragonMaster / RAIChU
  Reaction Analysis through Imaging of Chemical Units
  ☆14Updated 5 months ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• matthiaskoenig / brendapy
  BRENDA parser in python
  ☆21Updated 2 years ago
• NPLinker / nplinker
  A python framework for microbial natural products data mining by integrating genomics and metabolomics data
  ☆18Updated this week
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆25Updated 2 months ago
• proteinphysiologylab / frustratometeR
  ☆34Updated 5 months ago
• pnnl / MSAC
  ☆22Updated this week
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆37Updated last week
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆32Updated last year
• graik / biskit
  A Python platform for Structural Bioinformatics
  ☆56Updated last week
• biosustain / Maud
  Enzyme models that take into account kinetics, allostery and thermodynamics
  ☆27Updated 6 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆18Updated 4 months ago
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆33Updated 2 months ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆35Updated 3 years ago
• ipb-halle / MetFragRelaunched
  Relaunch of the initial MetFrag project.
  ☆18Updated 2 weeks ago
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆82Updated last year
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆22Updated last month
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆37Updated 2 years ago