lynnlangit / TeamTeri

Related projects ⓘ

Alternatives and complementary repositories for TeamTeri

• lynnlangit / aws-for-bioinformatics
  AWS for Bioinformatics Researchers
  ☆117Updated 3 months ago
• aws-samples / amazon-omics-tutorials
  ☆63Updated this week
• broadinstitute / genomics-in-the-cloud
  Source code and related materials for the O'Reilly book
  ☆93Updated 2 years ago
• grst / snakemake_nextflow_wdl
  simple comparison of snakemake, nextflow and cromwell/wdl
  ☆49Updated 4 years ago
• sib-swiss / statistics-and-machine-learning-training
  ☆20Updated 11 months ago
• prog4biol / pfb2022
  Programming for Biology Class @ CSHL 2022
  ☆12Updated last month
• lynnlangit / gcp-for-bioinformatics
  GCP for Bioinformatics Researchers
  ☆235Updated last week
• lifebit-ai / GATK
  Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices
  ☆12Updated 4 years ago
• nextflow-io / rnaseq-nf
  A proof of concept of RNAseq pipeline
  ☆72Updated 2 weeks ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆80Updated last week
• NCBI-Hackathons / Community_Software_Tools_for_NGS
  ☆61Updated 8 years ago
• PacktPublishing / Deep-Learning-for-Genomics-
  ☆29Updated last year
• sib-swiss / first-steps-with-python-training
  repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
  ☆54Updated last month
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆70Updated this week
• aws / amazon-genomics-cli
  ☆147Updated 6 months ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 2 years ago
• gatk-workflows / five-dollar-genome-analysis-pipeline
  Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline
  ☆57Updated 4 years ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆51Updated last week
• seqeralabs / nextflow-tutorial
  Nextflow training material for introductory tutorial
  ☆103Updated 2 years ago
• openwdl / learn-wdl
  Educational materials for learning WDL
  ☆122Updated 8 months ago
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆85Updated this week
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆57Updated last year
• bigbio / nf-workflows
  Repository of Nextflow+BioContainers workflows
  ☆14Updated 3 years ago
• ewels / AWS-iGenomes
  Documentation and description of AWS iGenomes S3 resource.
  ☆107Updated 4 years ago
• HussainAther / awesome-alternative-splicing
  Alternative splicing resource
  ☆51Updated 6 years ago
• stevekm / nextflow-demos
  Example Nextflow pipelines and programming techniques
  ☆102Updated 3 months ago
• schatzlab / appliedgenomics2018
  Materials for Spring 2018 Applied Genomics Course
  ☆77Updated 5 years ago
• CRG-CNAG / CalliNGS-NF
  GATK RNA-Seq Variant Calling in Nextflow
  ☆132Updated last year
• genome / analysis-workflows
  Open workflow definitions for genomic analysis from MGI at WUSM.
  ☆102Updated 4 months ago
• gatk-workflows / seq-format-conversion
  Workflows for converting between sequence data formats
  ☆37Updated 3 years ago